4oog

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal structure of yeast RNase III (Rnt1p) complexed with the product of dsRNA processing==
==Crystal structure of yeast RNase III (Rnt1p) complexed with the product of dsRNA processing==
-
<StructureSection load='4oog' size='340' side='right' caption='[[4oog]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
+
<StructureSection load='4oog' size='340' side='right'caption='[[4oog]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4oog]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Baker's_yeast Baker's yeast]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OOG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4OOG FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4oog]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OOG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4OOG FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2nug|2nug]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4oog FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4oog OCA], [https://pdbe.org/4oog PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4oog RCSB], [https://www.ebi.ac.uk/pdbsum/4oog PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4oog ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RNT1, YM9408.01C, YM9959.21, YMR239C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Baker's yeast])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribonuclease_III Ribonuclease III], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.26.3 3.1.26.3] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4oog FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4oog OCA], [http://pdbe.org/4oog PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4oog RCSB], [http://www.ebi.ac.uk/pdbsum/4oog PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4oog ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/RNT1_YEAST RNT1_YEAST]] DsRNA-specific nuclease that cleaves eukaryotic pre-ribosomal RNA at the U3 snoRNP-dependent A0 site in the 5'-external transcribed spacer (ETS) and in the 3'-ETS. In vitro, cleaves synthetic 5'-ETS RNA A0 site in the absence of snoRNA or other factors. Has an essential growth function in addition to pre-rRNA processing.
+
[https://www.uniprot.org/uniprot/RNT1_YEAST RNT1_YEAST] DsRNA-specific nuclease that cleaves eukaryotic pre-ribosomal RNA at the U3 snoRNP-dependent A0 site in the 5'-external transcribed spacer (ETS) and in the 3'-ETS. In vitro, cleaves synthetic 5'-ETS RNA A0 site in the absence of snoRNA or other factors. Has an essential growth function in addition to pre-rRNA processing.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 20:
==See Also==
==See Also==
-
*[[Ribonuclease|Ribonuclease]]
+
*[[Ribonuclease 3D structures|Ribonuclease 3D structures]]
-
*[[Temp|Temp]]
+
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Baker's yeast]]
+
[[Category: Large Structures]]
-
[[Category: Ribonuclease III]]
+
[[Category: Saccharomyces cerevisiae S288C]]
-
[[Category: Ji, X]]
+
[[Category: Ji X]]
-
[[Category: Liang, Y H]]
+
[[Category: Liang Y-H]]
-
[[Category: Double-stranded rna]]
+
-
[[Category: Double-stranded rna-binding domain]]
+
-
[[Category: Dsrna-specific rnase]]
+
-
[[Category: Endoribonuclease]]
+
-
[[Category: Hydrolase-rna complex]]
+
-
[[Category: Ribonuclease iii domain]]
+
-
[[Category: Rnase:rna complex]]
+

Revision as of 07:36, 25 January 2023

Crystal structure of yeast RNase III (Rnt1p) complexed with the product of dsRNA processing

PDB ID 4oog

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4oog"
Personal tools