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| ==Crystal structure of the C-terminal domain from yeast GCN2== | | ==Crystal structure of the C-terminal domain from yeast GCN2== |
- | <StructureSection load='4otm' size='340' side='right' caption='[[4otm]], [[Resolution|resolution]] 1.95Å' scene=''> | + | <StructureSection load='4otm' size='340' side='right'caption='[[4otm]], [[Resolution|resolution]] 1.95Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[4otm]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Baker's_yeast Baker's yeast]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OTM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4OTM FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4otm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OTM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4OTM FirstGlance]. <br> |
- | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4otn|4otn]]</td></tr> | + | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4otm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4otm OCA], [https://pdbe.org/4otm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4otm RCSB], [https://www.ebi.ac.uk/pdbsum/4otm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4otm ProSAT]</span></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AAS1, GCN2, YDR283C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Baker's yeast])</td></tr>
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- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Non-specific_serine/threonine_protein_kinase Non-specific serine/threonine protein kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.11.1 2.7.11.1] </span></td></tr>
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- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4otm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4otm OCA], [http://pdbe.org/4otm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4otm RCSB], [http://www.ebi.ac.uk/pdbsum/4otm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4otm ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| == Function == | | == Function == |
- | [[http://www.uniprot.org/uniprot/GCN2_YEAST GCN2_YEAST]] Stimulates GCN4 translation in amino acid-starved cells by phosphorylating the alpha subunit of eIF-2 (SUI2) on 'Ser-52'. | + | [https://www.uniprot.org/uniprot/GCN2_YEAST GCN2_YEAST] Stimulates GCN4 translation in amino acid-starved cells by phosphorylating the alpha subunit of eIF-2 (SUI2) on 'Ser-52'. |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| </div> | | </div> |
| <div class="pdbe-citations 4otm" style="background-color:#fffaf0;"></div> | | <div class="pdbe-citations 4otm" style="background-color:#fffaf0;"></div> |
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| + | ==See Also== |
| + | *[[Serine/threonine protein kinase 3D structures|Serine/threonine protein kinase 3D structures]] |
| == References == | | == References == |
| <references/> | | <references/> |
| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Baker's yeast]] | + | [[Category: Large Structures]] |
- | [[Category: Non-specific serine/threonine protein kinase]] | + | [[Category: Saccharomyces cerevisiae S288C]] |
- | [[Category: Georgiadis, M M]] | + | [[Category: Georgiadis MM]] |
- | [[Category: He, H]] | + | [[Category: He H]] |
- | [[Category: 4-stranded beta sheet 3 helix bundle]]
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- | [[Category: C-terminal regulatory domain]]
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- | [[Category: Gcn2]]
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- | [[Category: Regulatory domain of eif2 stress kinase]]
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- | [[Category: Transferase]]
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| Structural highlights
Function
GCN2_YEAST Stimulates GCN4 translation in amino acid-starved cells by phosphorylating the alpha subunit of eIF-2 (SUI2) on 'Ser-52'.
Publication Abstract from PubMed
In response to amino acid starvation, GCN2 phosphorylation of eIF2 leads to repression of general translation and initiation of gene reprogramming that facilitates adaptation to nutrient stress. GCN2 is a multidomain protein with key regulatory domains that directly monitor uncharged tRNAs that accumulate during nutrient limitation, leading to activation of this eIF2 kinase and translational control. A critical feature of regulation of this stress response kinase is its C-terminal domain (CTD). Here, we present high resolution crystal structures of murine and yeast CTDs, which guide a functional analysis of the mammalian GCN2. Despite low sequence identity, both yeast and mammalian CTDs share a core subunit structure and an unusual interdigitated dimeric form, albeit with significant differences. Disruption of the dimeric form of murine CTD led to loss of translational control by GCN2, suggesting that dimerization is critical for function as is true for yeast GCN2. However, although both CTDs bind single and double-stranded RNA, murine GCN2 does not appear to stably associate with the ribosome whereas yeast GCN2 does. This finding suggests that there are key regulatory differences between yeast and mammalian CTDs, which is consistent with structural differences.
Crystal structures of GCN2 C-terminal domains suggest regulatory differences in yeast and mammals.,He H, Singh I, Wek SA, Dey S, Baird TD, Wek RC, Georgiadis MM J Biol Chem. 2014 Apr 9. PMID:24719324[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ He H, Singh I, Wek SA, Dey S, Baird TD, Wek RC, Georgiadis MM. Crystal structures of GCN2 C-terminal domains suggest regulatory differences in yeast and mammals. J Biol Chem. 2014 Apr 9. PMID:24719324 doi:http://dx.doi.org/10.1074/jbc.M114.560789
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