This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4pi7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal structure of S. Aureus Autolysin E in complex with disaccharide NAM-NAG==
==Crystal structure of S. Aureus Autolysin E in complex with disaccharide NAM-NAG==
-
<StructureSection load='4pi7' size='340' side='right' caption='[[4pi7]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
+
<StructureSection load='4pi7' size='340' side='right'caption='[[4pi7]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4pi7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Staam Staam]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PI7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4PI7 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4pi7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_Mu50 Staphylococcus aureus subsp. aureus Mu50]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PI7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4PI7 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AMU:BETA-N-ACETYLMURAMIC+ACID'>AMU</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AMU:BETA-N-ACETYLMURAMIC+ACID'>AMU</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4pi8|4pi8]], [[4pi9|4pi9]], [[4pia|4pia]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4pi7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pi7 OCA], [https://pdbe.org/4pi7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4pi7 RCSB], [https://www.ebi.ac.uk/pdbsum/4pi7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4pi7 ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SAV2307 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=158878 STAAM])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4pi7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pi7 OCA], [http://pdbe.org/4pi7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4pi7 RCSB], [http://www.ebi.ac.uk/pdbsum/4pi7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4pi7 ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A0A0H3JT72_STAAM A0A0H3JT72_STAAM]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Staam]]
+
[[Category: Large Structures]]
-
[[Category: Jakas, A]]
+
[[Category: Staphylococcus aureus subsp. aureus Mu50]]
-
[[Category: Mihelic, M]]
+
[[Category: Jakas A]]
-
[[Category: Renko, M]]
+
[[Category: Mihelic M]]
-
[[Category: Turk, D]]
+
[[Category: Renko M]]
-
[[Category: Autolysin]]
+
[[Category: Turk D]]
-
[[Category: Disaccharide]]
+
-
[[Category: Glycosidase]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Peptidoglycan]]
+

Revision as of 13:05, 1 February 2023

Crystal structure of S. Aureus Autolysin E in complex with disaccharide NAM-NAG

PDB ID 4pi7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools