This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4pzl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:38, 8 February 2023) (edit) (undo)
 
Line 1: Line 1:
==The crystal structure of adenylate kinase from Francisella tularensis subsp. tularensis SCHU S4==
==The crystal structure of adenylate kinase from Francisella tularensis subsp. tularensis SCHU S4==
-
<StructureSection load='4pzl' size='340' side='right' caption='[[4pzl]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
+
<StructureSection load='4pzl' size='340' side='right'caption='[[4pzl]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4pzl]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Fratt Fratt]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PZL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4PZL FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4pzl]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Francisella_tularensis_subsp._tularensis_SCHU_S4 Francisella tularensis subsp. tularensis SCHU S4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PZL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4PZL FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4pzl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pzl OCA], [https://pdbe.org/4pzl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4pzl RCSB], [https://www.ebi.ac.uk/pdbsum/4pzl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4pzl ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">adk, FTT_1161 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=177416 FRATT])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Adenylate_kinase Adenylate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.3 2.7.4.3] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4pzl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pzl OCA], [http://pdbe.org/4pzl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4pzl RCSB], [http://www.ebi.ac.uk/pdbsum/4pzl PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4pzl ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/KAD_FRATT KAD_FRATT]] Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism (By similarity).
+
[https://www.uniprot.org/uniprot/KAD_FRATT KAD_FRATT] Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism (By similarity).
 +
 
 +
==See Also==
 +
*[[Adenylate kinase 3D structures|Adenylate kinase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Adenylate kinase]]
+
[[Category: Francisella tularensis subsp. tularensis SCHU S4]]
-
[[Category: Fratt]]
+
[[Category: Large Structures]]
-
[[Category: Anderson, W F]]
+
[[Category: Anderson WF]]
-
[[Category: Structural genomic]]
+
[[Category: Joachimiak A]]
-
[[Category: Joachimiak, A]]
+
[[Category: Kwon K]]
-
[[Category: Kwon, K]]
+
[[Category: Tan K]]
-
[[Category: Tan, K]]
+
[[Category: Zhou M]]
-
[[Category: Zhou, M]]
+
-
[[Category: Csgid]]
+
-
[[Category: National institute of allergy and infectious disease]]
+
-
[[Category: Niaid]]
+
-
[[Category: Transferase]]
+

Current revision

The crystal structure of adenylate kinase from Francisella tularensis subsp. tularensis SCHU S4

PDB ID 4pzl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools