1jv7

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[[Image:1jv7.jpg|left|200px]]
[[Image:1jv7.jpg|left|200px]]
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{{Structure
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<!--
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|PDB= 1jv7 |SIZE=350|CAPTION= <scene name='initialview01'>1jv7</scene>, resolution 2.25&Aring;
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The line below this paragraph, containing "STRUCTURE_1jv7", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=LI1:1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL'>LI1</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene>
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|GENE= Bop ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2242 Halobacterium salinarum])
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|DOMAIN=
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{{STRUCTURE_1jv7| PDB=1jv7 | SCENE= }}
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|RELATEDENTRY=[[1jv6|1JV6]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1jv7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jv7 OCA], [http://www.ebi.ac.uk/pdbsum/1jv7 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1jv7 RCSB]</span>
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'''BACTERIORHODOPSIN O-LIKE INTERMEDIATE STATE OF THE D85S MUTANT AT 2.25 ANGSTROM RESOLUTION'''
'''BACTERIORHODOPSIN O-LIKE INTERMEDIATE STATE OF THE D85S MUTANT AT 2.25 ANGSTROM RESOLUTION'''
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[[Category: Walian, P.]]
[[Category: Walian, P.]]
[[Category: 7-transmembrane]]
[[Category: 7-transmembrane]]
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[[Category: cubic lipid phase]]
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[[Category: Cubic lipid phase]]
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[[Category: d85s mutant]]
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[[Category: D85s mutant]]
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[[Category: haloarchaea]]
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[[Category: Haloarchaea]]
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[[Category: ion transport]]
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[[Category: Ion transport]]
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[[Category: o-like state]]
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[[Category: O-like state]]
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[[Category: photocycle intermediate]]
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[[Category: Photocycle intermediate]]
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[[Category: photoreceptor]]
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[[Category: Photoreceptor]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 21:57:54 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 21:39:32 2008''
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Revision as of 18:57, 2 May 2008

Template:STRUCTURE 1jv7

BACTERIORHODOPSIN O-LIKE INTERMEDIATE STATE OF THE D85S MUTANT AT 2.25 ANGSTROM RESOLUTION


Overview

Crystal structures are reported for the D85S and D85S/F219L mutants of the light-driven proton/hydroxyl-pump bacteriorhodopsin. These mutants crystallize in the orthorhombic C222(1) spacegroup, and provide the first demonstration that monoolein-based cubic lipid phase crystallization can support the growth of well-diffracting crystals in non-hexagonal spacegroups. Both structures exhibit similar and substantial differences relative to wild-type bacteriorhodopsin, suggesting that they represent inherent features resulting from neutralization of the Schiff base counterion Asp85. We argue that these structures provide a model for the last photocycle intermediate (O) of bacteriorhodopsin, in which Asp85 is protonated, the proton release group is deprotonated, and the retinal has reisomerized to all-trans. Unlike for the M and N photointermediates, where structural changes occur mainly on the cytoplasmic side, here the large-scale changes are confined to the extracellular side. As in the M intermediate, the side-chain of Arg82 is in a downward configuration, and in addition, a pi-cloud hydrogen bond forms between Trp189 NE1 and Trp138. On the cytoplasmic side, there is increased hydration near the surface, suggesting how Asp96 might communicate with the bulk during the rise of the O intermediate.

About this Structure

1JV7 is a Single protein structure of sequence from Halobacterium salinarum. Full crystallographic information is available from OCA.

Reference

Crystal structure of the D85S mutant of bacteriorhodopsin: model of an O-like photocycle intermediate., Rouhani S, Cartailler JP, Facciotti MT, Walian P, Needleman R, Lanyi JK, Glaeser RM, Luecke H, J Mol Biol. 2001 Oct 26;313(3):615-28. PMID:11676543 Page seeded by OCA on Fri May 2 21:57:54 2008

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