6rca

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 3: Line 3:
<StructureSection load='6rca' size='340' side='right'caption='[[6rca]], [[Resolution|resolution]] 1.34&Aring;' scene=''>
<StructureSection load='6rca' size='340' side='right'caption='[[6rca]], [[Resolution|resolution]] 1.34&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6rca]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillo_virgola_del_koch"_trevisan_1884 "bacillo virgola del koch" trevisan 1884]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RCA OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6RCA FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6rca]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=5our 5our]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RCA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6RCA FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BJE:2,2-Anhydro-(1-beta-D-ribofuranosyl)uracil'>BJE</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BJE:2,2-Anhydro-(1-beta-D-ribofuranosyl)uracil'>BJE</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[5our|5our]]</div></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6rca FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rca OCA], [https://pdbe.org/6rca PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6rca RCSB], [https://www.ebi.ac.uk/pdbsum/6rca PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6rca ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">udp, udp_1, B2J67_05455, B2J68_05210, B2J71_05165, BFX32_04820, BTY66_05555, CEF09_03900, DN30_1909, EN12_05055, ERS013138_02408, ERS013140_00580, ERS013186_00327, ERS013199_00063, ERS013201_00032, ERS013202_00369, ERS013206_00377 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=666 "Bacillo virgola del Koch" Trevisan 1884])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Uridine_phosphorylase Uridine phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.3 2.4.2.3] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6rca FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rca OCA], [http://pdbe.org/6rca PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6rca RCSB], [http://www.ebi.ac.uk/pdbsum/6rca PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6rca ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9K4U1_VIBCL Q9K4U1_VIBCL]
 +
 +
==See Also==
 +
*[[Uridine phosphorylase 3D structures|Uridine phosphorylase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacillo virgola del koch trevisan 1884]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Uridine phosphorylase]]
+
[[Category: Vibrio cholerae]]
-
[[Category: Balaev, V V]]
+
[[Category: Balaev VV]]
-
[[Category: Betzel, C]]
+
[[Category: Betzel C]]
-
[[Category: Eistrikh-Geller, P A]]
+
[[Category: Eistrikh-Geller PA]]
-
[[Category: Gabdoulkhakov, A G]]
+
[[Category: Gabdoulkhakov AG]]
-
[[Category: Lashkov, A A]]
+
[[Category: Lashkov AA]]
-
[[Category: Prokofev, I I]]
+
[[Category: Prokofev II]]
-
[[Category: Rossmann fold]]
+
-
[[Category: Transferase]]
+

Revision as of 10:16, 15 February 2023

X-ray structure uridine phosphorylase from Vibrio cholerae in complex with 2.2'-anhydrouridine at 1.34 A

PDB ID 6rca

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools