7xhx

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'''Unreleased structure'''
 
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The entry 7xhx is ON HOLD until 2024-04-11
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==Crystal structure of metallo-beta-lactamase IMP-6==
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<StructureSection load='7xhx' size='340' side='right'caption='[[7xhx]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[7xhx]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=6lvj 6lvj]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7XHX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7XHX FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7xhx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7xhx OCA], [https://pdbe.org/7xhx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7xhx RCSB], [https://www.ebi.ac.uk/pdbsum/7xhx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7xhx ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/K4PWX3_ECOLX K4PWX3_ECOLX]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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IMP-type metallo-beta-lactamases confer resistance to carbapenems and a broad spectrum of beta-lactam antibiotics. IMP-6 and IMP-1 differ by only a point mutation: Ser262 in IMP-1 and Gly262 in IMP-6. The kcat/Km values of IMP-1 for imipenem and meropenem are nearly identical; however, for IMP-6, the kcat/Km for meropenem is 7-fold that for imipenem. In clinical practice, this may result in an ineffective therapeutic regimen and, consequently, in treatment failure. Here, we report the crystal structures of IMP-6 and IMP-1 with the same space group and similar cell constants at resolutions of 1.70 and 1.94 A, respectively. The overall structures of IMP-6 and IMP-1 are similar. However, the loop region (residues 60-66), which participates in substrate binding, is more flexible in IMP-6 than in IMP-1. This difference in flexibility determines the substrate specificity of IMP-type metallo-beta-lactamases for imipenem and meropenem. The amino acid at position 262 alters the mobility of His263; this affects the flexibility of the loop via a hydrogen bond with Pro68, which plays the role of a hinge in IMP-type metallo-beta-lactamases. The substitution of Pro68 with a glycine elicited an increase in the Km of IMP-6 for imipenem, whereas the affinity for meropenem remained unchanged.
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Authors: Yamamoto, K., Tanaka, H., Kurisu, G., Nakano, R., Yano, H., Sakai, H.
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Structural insights into the substrate specificity of IMP-6 and IMP-1 metallo-beta-lactamases.,Yamamoto K, Tanaka H, Kurisu G, Nakano R, Yano H, Sakai H J Biochem. 2022 Dec 27;173(1):21-30. doi: 10.1093/jb/mvac080. PMID:36174533<ref>PMID:36174533</ref>
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Description: Crystal structure of metallo-beta-lactamase IMP-6
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Yamamoto, K]]
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<div class="pdbe-citations 7xhx" style="background-color:#fffaf0;"></div>
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[[Category: Tanaka, H]]
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== References ==
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[[Category: Kurisu, G]]
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<references/>
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[[Category: Sakai, H]]
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__TOC__
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[[Category: Nakano, R]]
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</StructureSection>
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[[Category: Yano, H]]
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[[Category: Escherichia coli]]
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[[Category: Large Structures]]
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[[Category: Kurisu G]]
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[[Category: Nakano R]]
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[[Category: Sakai H]]
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[[Category: Tanaka H]]
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[[Category: Yamamoto K]]
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[[Category: Yano H]]

Revision as of 10:17, 15 February 2023

Crystal structure of metallo-beta-lactamase IMP-6

PDB ID 7xhx

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