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| <StructureSection load='4r19' size='340' side='right'caption='[[4r19]], [[Resolution|resolution]] 1.80Å' scene=''> | | <StructureSection load='4r19' size='340' side='right'caption='[[4r19]], [[Resolution|resolution]] 1.80Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[4r19]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Plaf7 Plaf7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4R19 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4R19 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4r19]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_falciparum_3D7 Plasmodium falciparum 3D7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4R19 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4R19 FirstGlance]. <br> |
- | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4r1a|4r1a]], [[4r1b|4r1b]], [[4r1c|4r1c]]</td></tr> | + | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4r19 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4r19 OCA], [https://pdbe.org/4r19 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4r19 RCSB], [https://www.ebi.ac.uk/pdbsum/4r19 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4r19 ProSAT]</span></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AMA1, PF11_0344 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=36329 PLAF7])</td></tr>
| + | |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4r19 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4r19 OCA], [http://pdbe.org/4r19 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4r19 RCSB], [http://www.ebi.ac.uk/pdbsum/4r19 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4r19 ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/Q7KQK5_PLAF7 Q7KQK5_PLAF7] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| </StructureSection> | | </StructureSection> |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Plaf7]] | + | [[Category: Plasmodium falciparum 3D7]] |
- | [[Category: Lim, S S]] | + | [[Category: Lim SS]] |
- | [[Category: McGowan, S]] | + | [[Category: McGowan S]] |
- | [[Category: Norton, R S]] | + | [[Category: Norton RS]] |
- | [[Category: Cell invasion]]
| + | |
- | [[Category: Erythrocyte invasion by merozoite]]
| + | |
- | [[Category: Moving junction complex]]
| + | |
- | [[Category: Pan fold]]
| + | |
- | [[Category: Ron2]]
| + | |
| Structural highlights
Function
Q7KQK5_PLAF7
Publication Abstract from PubMed
Apical membrane antigen 1 (AMA1) interacts with RON2 to form a protein complex that plays a key role in the invasion of host cells by malaria parasites. Blocking this protein-protein interaction represents a potential route to controlling malaria and related parasitic diseases, but the polymorphic nature of AMA1 has proven to be a major challenge to vaccine-induced antibodies and peptide inhibitors exerting strain-transcending inhibitory effects. Here we present the X-ray crystal structure of AMA1 domains I and II from Plasmodium falciparum strain FVO. We compare our new structure to those of AMA1 from P. falciparum 3D7 and Plasmodium vivax. A combination of normalized B factor analysis and computational methods has been used to investigate the flexibility of the domain I loops and how this correlates with their roles in determining the strain specificity of human antibody responses and inhibitory peptides. We also investigated the domain II loop, a key region involved in inhibitor binding, by comparison of multiple AMA1 crystal structures. Collectively, these results provide valuable insights that should contribute to the design of strain-transcending agents targeting P. falciparum AMA1.
Structure and dynamics of apical membrane antigen 1 from Plasmodium falciparum FVO.,Lim SS, Yang W, Krishnarjuna B, Kannan Sivaraman K, Chandrashekaran IR, Kass I, MacRaild CA, Devine SM, Debono CO, Anders RF, Scanlon MJ, Scammells PJ, Norton RS, McGowan S Biochemistry. 2014 Nov 25;53(46):7310-20. doi: 10.1021/bi5012089. Epub 2014 Nov, 14. PMID:25360546[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Lim SS, Yang W, Krishnarjuna B, Kannan Sivaraman K, Chandrashekaran IR, Kass I, MacRaild CA, Devine SM, Debono CO, Anders RF, Scanlon MJ, Scammells PJ, Norton RS, McGowan S. Structure and dynamics of apical membrane antigen 1 from Plasmodium falciparum FVO. Biochemistry. 2014 Nov 25;53(46):7310-20. doi: 10.1021/bi5012089. Epub 2014 Nov, 14. PMID:25360546 doi:http://dx.doi.org/10.1021/bi5012089
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