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| | <StructureSection load='4r81' size='340' side='right'caption='[[4r81]], [[Resolution|resolution]] 1.50Å' scene=''> | | <StructureSection load='4r81' size='340' side='right'caption='[[4r81]], [[Resolution|resolution]] 1.50Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[4r81]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Mettm Mettm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4R81 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4R81 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4r81]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanothermobacter_marburgensis_str._Marburg Methanothermobacter marburgensis str. Marburg]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4R81 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4R81 FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MTBMA_c07320 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=79929 METTM])</td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4r81 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4r81 OCA], [https://pdbe.org/4r81 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4r81 RCSB], [https://www.ebi.ac.uk/pdbsum/4r81 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4r81 ProSAT]</span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4r81 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4r81 OCA], [http://pdbe.org/4r81 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4r81 RCSB], [http://www.ebi.ac.uk/pdbsum/4r81 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4r81 ProSAT]</span></td></tr> | + | |
| | </table> | | </table> |
| | + | == Function == |
| | + | [https://www.uniprot.org/uniprot/D9PVS9_METTM D9PVS9_METTM] |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| | == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| | </StructureSection> | | </StructureSection> |
| | [[Category: Large Structures]] | | [[Category: Large Structures]] |
| - | [[Category: Mettm]] | + | [[Category: Methanothermobacter marburgensis str. Marburg]] |
| - | [[Category: Divne, C]] | + | [[Category: Divne C]] |
| - | [[Category: Herwig, C]] | + | [[Category: Herwig C]] |
| - | [[Category: Spadiut, O]] | + | [[Category: Spadiut O]] |
| - | [[Category: Tan, T C]] | + | [[Category: Tan TC]] |
| - | [[Category: Ullmann, E]] | + | [[Category: Ullmann E]] |
| - | [[Category: Flavodoxin-like/fold]]
| + | |
| - | [[Category: Fmn]]
| + | |
| - | [[Category: Nad]]
| + | |
| - | [[Category: Oxidoreductase]]
| + | |
| Structural highlights
Function
D9PVS9_METTM
Publication Abstract from PubMed
Methanothermobacter marburgensis is a strictly anaerobic, thermophilic methanogenic archaeon that uses methanogenesis to convert H2 and CO2 to energy. M. marburgensis is one of the best studied methanogens, and all genes required for methanogenic metabolism have been identified. Nonetheless, the present study describes a gene (Gene ID 9704440) coding for a putative NAD(P)H:quinone oxidoreductase that has not yet been identified as part of the metabolic machinery. The gene product, MmNQO, was successfully expressed, purified and characterized biochemically, as well as structurally. MmNQO was identified as a flavin-dependent NADH:quinone oxidoreductase with the capacity to oxidize NADH in the presence of a wide range of electron acceptors, whereas NADPH was oxidized with only three acceptors. The 1.50-A crystal structure of MmNQO features a homodimeric enzyme where each monomer comprises 196 residues folding into flavodoxin-like alpha/beta domains with non-covalently bound flavin mononucleotide (FMN). The closest structural homolog is the modulator of drug activity B from Streptococcus mutans with 1.6 A root-mean-square deviation on 161 Calpha atoms and 28% amino acid sequence identity. The low similarity at sequence and structural level suggests that MmNQO is unique among NADH:quinone oxidoreductases characterized to date. Based on preliminary bioreactor experiments, MmNQO could provide a useful tool to prevent overflow metabolism in applications that require cells with high energy demand.
A novel cytosolic NADH:quinone oxidoreductase from Methanothermobacter marburgensis.,Ullmann E, Tan TC, Gundinger T, Herwig C, Divne C, Spadiut O Biosci Rep. 2014 Nov 5. PMID:25372605[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Ullmann E, Tan TC, Gundinger T, Herwig C, Divne C, Spadiut O. A novel cytosolic NADH:quinone oxidoreductase from Methanothermobacter marburgensis. Biosci Rep. 2014 Nov 5. PMID:25372605 doi:http://dx.doi.org/10.1042/BSR20140143
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