This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4rap

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:47, 2 March 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='4rap' size='340' side='right'caption='[[4rap]], [[Resolution|resolution]] 2.88&Aring;' scene=''>
<StructureSection load='4rap' size='340' side='right'caption='[[4rap]], [[Resolution|resolution]] 2.88&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4rap]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoh1 Ecoh1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RAP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4RAP FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4rap]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_ETEC_H10407 Escherichia coli ETEC H10407]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RAP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4RAP FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4rap FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rap OCA], [https://pdbe.org/4rap PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4rap RCSB], [https://www.ebi.ac.uk/pdbsum/4rap PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4rap ProSAT]</span></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4q1q|4q1q]]</td></tr>
+
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">tibC, ETEC_2140 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=316401 ECOH1])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4rap FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rap OCA], [http://pdbe.org/4rap PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4rap RCSB], [http://www.ebi.ac.uk/pdbsum/4rap PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4rap ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/TIBC_ECOH1 TIBC_ECOH1]] Glycosylates the TibA adhesin.
+
[https://www.uniprot.org/uniprot/TIBC_ECOH1 TIBC_ECOH1] Glycosylates the TibA adhesin.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 20:
==See Also==
==See Also==
-
*[[Glycosyltransferase|Glycosyltransferase]]
+
*[[Glycosyltransferase 3D structures|Glycosyltransferase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Ecoh1]]
+
[[Category: Escherichia coli ETEC H10407]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Lu, Q]]
+
[[Category: Lu Q]]
-
[[Category: Shao, F]]
+
[[Category: Shao F]]
-
[[Category: Xu, Y]]
+
[[Category: Xu Y]]
-
[[Category: Yao, Q]]
+
[[Category: Yao Q]]
-
[[Category: Adp-heptose]]
+
-
[[Category: Gt-b fold]]
+
-
[[Category: Tiba]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal structure of bacterial iron-containing dodecameric glycosyltransferase TibC from enterotoxigenic E.coli H10407

PDB ID 4rap

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools