This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4rk5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:00, 2 March 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='4rk5' size='340' side='right'caption='[[4rk5]], [[Resolution|resolution]] 1.35&Aring;' scene=''>
<StructureSection load='4rk5' size='340' side='right'caption='[[4rk5]], [[Resolution|resolution]] 1.35&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4rk5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lacp3 Lacp3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RK5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4RK5 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4rk5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lacticaseibacillus_paracasei_ATCC_334 Lacticaseibacillus paracasei ATCC 334]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RK5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4RK5 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SUC:SUCROSE'>SUC</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=FRU:FRUCTOSE'>FRU</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PRD_900003:sucrose'>PRD_900003</scene></td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4rk5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rk5 OCA], [https://pdbe.org/4rk5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4rk5 RCSB], [https://www.ebi.ac.uk/pdbsum/4rk5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4rk5 ProSAT]</span></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4rk3|4rk3]], [[4rk4|4rk4]]</td></tr>
+
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LSEI_2103 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=321967 LACP3])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4rk5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rk5 OCA], [http://pdbe.org/4rk5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4rk5 RCSB], [http://www.ebi.ac.uk/pdbsum/4rk5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4rk5 ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q036L9_LACP3 Q036L9_LACP3]
 +
 +
==See Also==
 +
*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Lacp3]]
+
[[Category: Lacticaseibacillus paracasei ATCC 334]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Almo, S C]]
+
[[Category: Al Obaidi N]]
-
[[Category: Attonito, J D]]
+
[[Category: Almo SC]]
-
[[Category: Bhosle, R]]
+
[[Category: Attonito JD]]
-
[[Category: Chamala, S]]
+
[[Category: Bhosle R]]
-
[[Category: Chowdhury, S]]
+
[[Category: Chamala S]]
-
[[Category: EFI, Enzyme Function Initiative]]
+
[[Category: Chowdhury S]]
-
[[Category: Gerlt, J A]]
+
[[Category: Gerlt JA]]
-
[[Category: Glenn, A Scott]]
+
[[Category: Hillerich B]]
-
[[Category: Hillerich, B]]
+
[[Category: Lafleur J]]
-
[[Category: Lafleur, J]]
+
[[Category: Love J]]
-
[[Category: Love, J]]
+
[[Category: Patskovsky Y]]
-
[[Category: Obaidi, N Al]]
+
[[Category: Scott Glenn A]]
-
[[Category: Patskovsky, Y]]
+
[[Category: Siedel RD]]
-
[[Category: Siedel, R D]]
+
[[Category: Toro R]]
-
[[Category: Toro, R]]
+
[[Category: Whalen KL]]
-
[[Category: Whalen, K L]]
+
-
[[Category: Efi]]
+
-
[[Category: Enzyme function initiative]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Sucrose]]
+
-
[[Category: Sugar binding]]
+
-
[[Category: Transcription regulation]]
+
-
[[Category: Transcription regulator]]
+
-
[[Category: Transcriptional factor]]
+

Current revision

Crystal structure of LacI family transcriptional regulator from Lactobacillus casei, Target EFI-512911, with bound sucrose

PDB ID 4rk5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools