This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5jsi

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:39, 8 March 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5jsi' size='340' side='right'caption='[[5jsi]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='5jsi' size='340' side='right'caption='[[5jsi]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5jsi]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"candidatus_actinomarina_minuta"_ghai_et_al._2013 "candidatus actinomarina minuta" ghai et al. 2013]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JSI OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5JSI FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5jsi]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Candidatus_Actinomarina_minuta Candidatus Actinomarina minuta]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JSI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5JSI FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=LFA:EICOSANE'>LFA</scene>, <scene name='pdbligand=OLC:(2R)-2,3-DIHYDROXYPROPYL+(9Z)-OCTADEC-9-ENOATE'>OLC</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=LFA:EICOSANE'>LFA</scene>, <scene name='pdbligand=LYR:N~6~-[(2Z,4E,6E,8E)-3,7-DIMETHYL-9-(2,6,6-TRIMETHYLCYCLOHEX-1-EN-1-YL)NONA-2,4,6,8-TETRAENYL]LYSINE'>LYR</scene>, <scene name='pdbligand=OLC:(2R)-2,3-DIHYDROXYPROPYL+(9Z)-OCTADEC-9-ENOATE'>OLC</scene></td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=LYR:N~6~-[(2Z,4E,6E,8E)-3,7-DIMETHYL-9-(2,6,6-TRIMETHYLCYCLOHEX-1-EN-1-YL)NONA-2,4,6,8-TETRAENYL]LYSINE'>LYR</scene></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5jsi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jsi OCA], [https://pdbe.org/5jsi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5jsi RCSB], [https://www.ebi.ac.uk/pdbsum/5jsi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5jsi ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5jsi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jsi OCA], [http://pdbe.org/5jsi PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5jsi RCSB], [http://www.ebi.ac.uk/pdbsum/5jsi PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5jsi ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/S5DM51_9ACTN S5DM51_9ACTN]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 24: Line 25:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Candidatus actinomarina minuta ghai et al. 2013]]
+
[[Category: Candidatus Actinomarina minuta]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Gordeliy, V]]
+
[[Category: Gordeliy V]]
-
[[Category: Gushchin, I]]
+
[[Category: Gushchin I]]
-
[[Category: Kovalev, K]]
+
[[Category: Kovalev K]]
-
[[Category: Melnikov, I]]
+
[[Category: Melnikov I]]
-
[[Category: Polovinkin, V]]
+
[[Category: Polovinkin V]]
-
[[Category: Popov, A]]
+
[[Category: Popov A]]
-
[[Category: Shevchenko, V]]
+
[[Category: Shevchenko V]]
-
[[Category: Iodide]]
+
-
[[Category: Membrane protein]]
+
-
[[Category: Transferase]]
+
-
[[Category: Unknown function]]
+

Current revision

Structure of membrane protein

PDB ID 5jsi

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools