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Glutamate dehydrogenase 3D structures

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Line 10: Line 10:
**[[6g2u]] – hGLDH2<br />
**[[6g2u]] – hGLDH2<br />
**[[1nr7]] – bGLDH – bovine<br />
**[[1nr7]] – bGLDH – bovine<br />
-
**[[6dhn]], [[6dhl]], [[3jcg]] – bGLDH1<br />
+
**[[6dhn]], [[6dhl]] – bGLDH1<br />
-
**[[5k12]] – bGLDH1 – Cryo-EM<br />
+
**[[3jcz]], [[5k12]], [[7vda]], [[8ew0]] – bGLDH1 – Cryo-EM<br />
**[[6yeh]] – AtGLDH1 – ''Arabidopsis thaliana''<br />
**[[6yeh]] – AtGLDH1 – ''Arabidopsis thaliana''<br />
**[[1gtm]] – GLDH – ''Pyrococcus furiosus''<br />
**[[1gtm]] – GLDH – ''Pyrococcus furiosus''<br />
Line 23: Line 23:
**[[2bma]] – PfGLDH – ''Plasmodium falciparum''<br />
**[[2bma]] – PfGLDH – ''Plasmodium falciparum''<br />
**[[3r3j]] - PfGLDH (mutant)<br />
**[[3r3j]] - PfGLDH (mutant)<br />
-
**[[3k8z]], [[3k92]] – GLDH (mutant) – ''Bacillus subtilis''<br />
+
**[[3k8z]], [[3k92]] – BsGLDH (mutant) – ''Bacillus subtilis''<br />
**[[2yfq]] - GLDH – ''Peptoniphilus asaccharolyticus''<br />
**[[2yfq]] - GLDH – ''Peptoniphilus asaccharolyticus''<br />
**[[3sbo]], [[4bht]], [[4fcc]] - EcGLDH – ''Escherichia coli''<br />
**[[3sbo]], [[4bht]], [[4fcc]] - EcGLDH – ''Escherichia coli''<br />
Line 33: Line 33:
**[[7f77]] – CaGLDH3 – ''Candida albican''<br />
**[[7f77]] – CaGLDH3 – ''Candida albican''<br />
-
*Glutamate dehydrogenase complex
+
*Glutamate dehydrogenase binary complex
-
**[[1hwy]] – bGLDH + NAD + 2-oxoglutarate <br />
+
**[[nqt]], [[6dhk]], [[8ar8]] - bGLDH + ADP<br />
-
**[[6dhd]] – bGLDH + NADP + GTP + glutamate <br />
+
-
**[[6dhm]] - bGLDH + NAD + GTP + glutamate <br />
+
-
**[[3ete]], [[3etg]] - bGLDH + NADP + GTP + inhibitor + glutamate <br />
+
-
**[[1nqt]], [[6dhk]] - bGLDH + ADP<br />
+
-
**[[6dhq]] - bGLDH + NADP + epicatechin-3-gallate<br />
+
**[[3jd0]] – bGLDH1 + GTP<br />
**[[3jd0]] – bGLDH1 + GTP<br />
 +
**[[3etd]] – bGLDH1 + drug<br />
**[[3jd1]], [[3jd2]] – bGLDH1 + NAD<br />
**[[3jd1]], [[3jd2]] – bGLDH1 + NAD<br />
-
**[[3jd3]], [[3jd4]] – bGLDH1 + GTP + NAD<br />
 
-
**[[6dhm]], [[6dhq]] – bGLDH1 + GTP + NADP + Glu<br />
 
-
**[[6dhd]], [[6dhn]] – bGLDH1 + GTP + NAD + Glu<br />
 
**[[6dhl]] – bGLDH1 + epicatechin gallate<br />
**[[6dhl]] – bGLDH1 + epicatechin gallate<br />
**[[6yei]] – AtGLDH1 + NAD <br />
**[[6yei]] – AtGLDH1 + NAD <br />
-
**[[1bgv]] – CsGLDH + glutamate <br />
+
**[[1bgv]] – CsGLDH + Glu<br />
**[[1v9l]] - GLDH + NAD – ''Pyrobaculum islandicum''<br />
**[[1v9l]] - GLDH + NAD – ''Pyrobaculum islandicum''<br />
-
**[[3aoe]] - TtGLDH + leucine – ''Thermus thermophilus''<br />
+
**[[3aoe - TtGLDH + Leu – ''Thermus thermophilus''<br />
-
**[[3aog]] - TtGLDH + NH4 + glutamate <br />
+
**[[5gud]] – CgGLDH + NADP - ''Corynebacterium glutamicum'' <br />
-
**[[4fhn]] – EcGLDH + Nup37 + Nup120<br />
+
**[[8hho]], [[8hiq]], [[8hiz]], [[8hj3, [[8hj9]] – TpGLDH + NADP – Cryo EM <br />
-
**[[5ijz]] - CgGLDH + NAD + 2-oxoglutarate – ''Corynebacterium glutamicum''<br />
+
-
**[[5gud]] – CgGLDH + NADP <br />
+
**[[5xvv]] – AnGLDH + oxoglutarate <br />
**[[5xvv]] – AnGLDH + oxoglutarate <br />
 +
**[[7mfm]], [[7mft]] – BsGLDH + glutamate synthase – Cryo EM <br />
 +
 +
*Glutamate dehydrogenase higher complex
 +
 +
**[[1hwy]] – bGLDH + NAD + 2-oxoglutarate <br />
 +
**[[1hwz]] – bGLDH + NADP + GTP + Glu<br />
 +
**[[3mw9]] - bGLDH + NAD + GTP + Glu<br />
 +
**[[3ete]], [[3etg]] - bGLDH + NADP + GTP + inhibitor + Glu<br />
 +
**[[3qmu]] - bGLDH + NADP + epicatechin-e-gallate<br />
 +
**[[8ar7]] – bGLDH1 + ADP + Leu<br />
 +
**[[3jd3]], [[3jd4]] – bGLDH1 + GTP + NAD<br />
 +
**[[6dhm]], [[6dhq]] – bGLDH1 + GTP + NADP + Glu<br />
 +
**[[6dhd]], [[6dhn]] – bGLDH1 + GTP + NAD + Glu<br />
 +
**[[3aog]] - TtGLDH + NH4 + Glu<br />
 +
**[[4fhn]] – EcGLDH + Nup37 + Nup120<br />
 +
**[[5ijz]] - CgGLDH + NAD + 2-oxoglutarate <br />
**[[5xvx]] – AnGLDH + NADP + oxoglutarate <br />
**[[5xvx]] – AnGLDH + NADP + oxoglutarate <br />
**[[5xw0]] – AnGLDH + NADP + isophthalate <br />
**[[5xw0]] – AnGLDH + NADP + isophthalate <br />
**[[5xwc]] – AnGLDH + NADP + iminoglutarate + amino-hydroxyglutarate<br />
**[[5xwc]] – AnGLDH + NADP + iminoglutarate + amino-hydroxyglutarate<br />
**[[7f79]] – CaGLDH + NADP + ketoglutarate <br />
**[[7f79]] – CaGLDH + NADP + ketoglutarate <br />
 +
**[[7ecs]] – AtGLDH + NADP + malonate – ''Aspergillus terreus''<br />
 +
**[[7ect]] – AtGLDH + NADP + tartrate <br />
 +
**[[7ecr]] – AtGLDH + ADP-ribose + succinate <br />
 +
}}
}}
[[Category:Topic Page]]
[[Category:Topic Page]]

Revision as of 10:16, 14 March 2023

3D structures of glutamate dehydrogenase

Updated on 14-March-2023 {{#tree:id=OrganizedByTopic|openlevels=0|

  • Glutamate dehydrogenase
    • 1l1f – hGLDH1 – human
    • 1nr1, 6dqg – hGLDH1 (mutant)
    • 6g2u – hGLDH2
    • 1nr7 – bGLDH – bovine
    • 6dhn, 6dhl – bGLDH1
    • 3jcz, 5k12, 7vda, 8ew0 – bGLDH1 – Cryo-EM
    • 6yeh – AtGLDH1 – Arabidopsis thaliana
    • 1gtm – GLDH – Pyrococcus furiosus
    • 1hrd – CsGLDH – Clostridium symbiosum
    • 1aup, 1k89 – CsGLDH (mutant)
    • 1bvu – GLDH – Thermococcus litoralis
    • 1euz - TpGLDH – Thermococcus profundus
    • 6jna, 6jnc, 6jn9, 6jnd – TpGLDH – Cryo EM
    • 1b26 – TmGLDH – Thermotoga maritima
    • 1b3b, 2tmg - TmGLDH (mutant)
    • 2bma – PfGLDH – Plasmodium falciparum
    • 3r3j - PfGLDH (mutant)
    • 3k8z, 3k92 – BsGLDH (mutant) – Bacillus subtilis
    • 2yfq - GLDH – Peptoniphilus asaccharolyticus
    • 3sbo, 4bht, 4fcc - EcGLDH – Escherichia coli
    • 2yfh – EcGLDH/CsGLDH
    • 4xgi – GLDH – Burkholderia thailandensis
    • 5xvi – AnGLDH – Aspergillus niger
    • 7jsr – MsGLDH – Mycolicibacterium smegmatis
    • 7a1d – MsGLDH - Cryo-EM
    • 7f77 – CaGLDH3 – Candida albican
  • Glutamate dehydrogenase binary complex
    • nqt, 6dhk, 8ar8 - bGLDH + ADP
    • 3jd0 – bGLDH1 + GTP
    • 3etd – bGLDH1 + drug
    • 3jd1, 3jd2 – bGLDH1 + NAD
    • 6dhl – bGLDH1 + epicatechin gallate
    • 6yei – AtGLDH1 + NAD
    • 1bgv – CsGLDH + Glu
    • 1v9l - GLDH + NAD – Pyrobaculum islandicum
    • [[3aoe - TtGLDH + Leu – Thermus thermophilus
    • 5gud – CgGLDH + NADP - Corynebacterium glutamicum
    • 8hho, 8hiq, 8hiz, [[8hj3, 8hj9 – TpGLDH + NADP – Cryo EM
    • 5xvv – AnGLDH + oxoglutarate
    • 7mfm, 7mft – BsGLDH + glutamate synthase – Cryo EM
  • Glutamate dehydrogenase higher complex
    • 1hwy – bGLDH + NAD + 2-oxoglutarate
    • 1hwz – bGLDH + NADP + GTP + Glu
    • 3mw9 - bGLDH + NAD + GTP + Glu
    • 3ete, 3etg - bGLDH + NADP + GTP + inhibitor + Glu
    • 3qmu - bGLDH + NADP + epicatechin-e-gallate
    • 8ar7 – bGLDH1 + ADP + Leu
    • 3jd3, 3jd4 – bGLDH1 + GTP + NAD
    • 6dhm, 6dhq – bGLDH1 + GTP + NADP + Glu
    • 6dhd, 6dhn – bGLDH1 + GTP + NAD + Glu
    • 3aog - TtGLDH + NH4 + Glu
    • 4fhn – EcGLDH + Nup37 + Nup120
    • 5ijz - CgGLDH + NAD + 2-oxoglutarate
    • 5xvx – AnGLDH + NADP + oxoglutarate
    • 5xw0 – AnGLDH + NADP + isophthalate
    • 5xwc – AnGLDH + NADP + iminoglutarate + amino-hydroxyglutarate
    • 7f79 – CaGLDH + NADP + ketoglutarate
    • 7ecs – AtGLDH + NADP + malonate – Aspergillus terreus
    • 7ect – AtGLDH + NADP + tartrate
    • 7ecr – AtGLDH + ADP-ribose + succinate

}}

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Joel L. Sussman

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