1k6l

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[[Image:1k6l.gif|left|200px]]
[[Image:1k6l.gif|left|200px]]
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{{Structure
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|PDB= 1k6l |SIZE=350|CAPTION= <scene name='initialview01'>1k6l</scene>, resolution 3.10&Aring;
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The line below this paragraph, containing "STRUCTURE_1k6l", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=BCL:BACTERIOCHLOROPHYLL+A'>BCL</scene>, <scene name='pdbligand=BPH:BACTERIOPHEOPHYTIN+A'>BPH</scene>, <scene name='pdbligand=CDL:CARDIOLIPIN'>CDL</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=LDA:LAURYL+DIMETHYLAMINE-N-OXIDE'>LDA</scene>, <scene name='pdbligand=SPN:SPEROIDENONE'>SPN</scene>, <scene name='pdbligand=U10:UBIQUINONE-10'>U10</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY=
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|GENE= PUFQBALMX ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1063 Rhodobacter sphaeroides])
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|DOMAIN=
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{{STRUCTURE_1k6l| PDB=1k6l | SCENE= }}
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|RELATEDENTRY=[[1k6n|1k6n]], [[2rcr|2rcr]], [[1pcr|1pcr]], [[1qov|1qov]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1k6l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k6l OCA], [http://www.ebi.ac.uk/pdbsum/1k6l PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1k6l RCSB]</span>
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'''Photosynethetic Reaction Center from Rhodobacter sphaeroides'''
'''Photosynethetic Reaction Center from Rhodobacter sphaeroides'''
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[[Category: Schiffer, M.]]
[[Category: Schiffer, M.]]
[[Category: Wong, T N.]]
[[Category: Wong, T N.]]
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[[Category: membrane protein]]
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[[Category: Membrane protein]]
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[[Category: photosynthetic reaction center]]
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[[Category: Photosynthetic reaction center]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 22:22:09 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 21:44:06 2008''
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Revision as of 19:22, 2 May 2008

Template:STRUCTURE 1k6l

Photosynethetic Reaction Center from Rhodobacter sphaeroides


Overview

We report on the unexpected structural changes caused by substitution of acidic amino acids in the Q(B) binding pocket of the bacterial photosynthetic reaction center by alanines. The mutations targeted key residues L212Glu and L213Asp of this transmembrane protein-cofactor complex. The amino acid substitutions in the L212Ala-L213Ala mutant reaction center ("AA") were known to affect the delivery of protons after the light-induced generation of Q(B)(-), which renders the AA strain incapable of photosynthetic growth. The AA structure not only revealed side chain rearrangements but also showed movement of the main chain segments that are contiguous with the mutation sites. The alanine substitutions caused an expansion of the cavity rather than its collapse. In addition, Q(B) is found mainly in the binding site that is proximal to the iron-ligand complex (closest to Q(A)) as opposed to its distal binding site (furthest from Q(A)) in the structure of the wild-type reaction center. The observed rearrangements in the structure of the AA reaction center establish a new balance between charged residues of an interactive network near Q(B). This structurally and electrostatically altered complex forms the basis for future understanding of the structural basis for proton transfer in active reaction centers which retain the alanine substitutions but carry a distant compensatory mutation.

About this Structure

1K6L is a Protein complex structure of sequences from Rhodobacter sphaeroides. Full crystallographic information is available from OCA.

Reference

The structure of a mutant photosynthetic reaction center shows unexpected changes in main chain orientations and quinone position., Pokkuluri PR, Laible PD, Deng YL, Wong TN, Hanson DK, Schiffer M, Biochemistry. 2002 May 14;41(19):5998-6007. PMID:11993994 Page seeded by OCA on Fri May 2 22:22:09 2008

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