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| <StructureSection load='4tqv' size='340' side='right'caption='[[4tqv]], [[Resolution|resolution]] 4.50Å' scene=''> | | <StructureSection load='4tqv' size='340' side='right'caption='[[4tqv]], [[Resolution|resolution]] 4.50Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[4tqv]] is a 16 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhizomonas_sp. Rhizomonas sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4TQV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4TQV FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4tqv]] is a 16 chain structure with sequence from [https://en.wikipedia.org/wiki/Sphingomonas_sp. Sphingomonas sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4TQV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4TQV FirstGlance]. <br> |
- | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4tqu|4tqu]]</td></tr> | + | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4tqv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4tqv OCA], [https://pdbe.org/4tqv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4tqv RCSB], [https://www.ebi.ac.uk/pdbsum/4tqv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4tqv ProSAT]</span></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">algM1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=28214 Rhizomonas sp.]), algM2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=28214 Rhizomonas sp.]), algS ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=28214 Rhizomonas sp.])</td></tr>
| + | |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4tqv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4tqv OCA], [http://pdbe.org/4tqv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4tqv RCSB], [http://www.ebi.ac.uk/pdbsum/4tqv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4tqv ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/Q9KWT8_SPHSX Q9KWT8_SPHSX] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| </StructureSection> | | </StructureSection> |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Rhizomonas sp]] | + | [[Category: Sphingomonas sp]] |
- | [[Category: Hashimoto, W]] | + | [[Category: Hashimoto W]] |
- | [[Category: Itoh, T]] | + | [[Category: Itoh T]] |
- | [[Category: Kaneko, A]] | + | [[Category: Kaneko A]] |
- | [[Category: Maruyama, Y]] | + | [[Category: Maruyama Y]] |
- | [[Category: Mikami, B]] | + | [[Category: Mikami B]] |
- | [[Category: Murata, K]] | + | [[Category: Murata K]] |
- | [[Category: Nishitani, Y]] | + | [[Category: Nishitani Y]] |
- | [[Category: Abc]]
| + | |
- | [[Category: Alginate]]
| + | |
- | [[Category: Sphingomona]]
| + | |
- | [[Category: Transport protein]]
| + | |
- | [[Category: Transporter]]
| + | |
| Structural highlights
Function
Q9KWT8_SPHSX
Publication Abstract from PubMed
The acidic polysaccharide alginate represents a promising marine biomass for the microbial production of biofuels, although the molecular and structural characteristics of alginate transporters remain to be clarified. In Sphingomonas sp. A1, the ATP-binding cassette transporter AlgM1M2SS is responsible for the import of alginate across the cytoplasmic membrane. Here, we present the substrate-transport characteristics and quaternary structure of AlgM1M2SS. The addition of poly- or oligoalginate enhanced the ATPase activity of reconstituted AlgM1M2SS coupled with one of the periplasmic solute-binding proteins, AlgQ1 or AlgQ2. External fluorescence-labeled oligoalginates were specifically imported into AlgM1M2SS-containing proteoliposomes in the presence of AlgQ2, ATP, and Mg2+. The crystal structure of AlgQ2-bound AlgM1M2SS adopts an inward-facing conformation. The interaction between AlgQ2 and AlgM1M2SS induces the formation of an alginate-binding tunnel-like structure accessible to the solvent. The translocation route inside the transmembrane domains contains charged residues suitable for the import of acidic saccharides.
Structure of a Bacterial ABC Transporter Involved in the Import of an Acidic Polysaccharide Alginate.,Maruyama Y, Itoh T, Kaneko A, Nishitani Y, Mikami B, Hashimoto W, Murata K Structure. 2015 Jul 21. pii: S0969-2126(15)00274-9. doi:, 10.1016/j.str.2015.06.021. PMID:26235029[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Maruyama Y, Itoh T, Kaneko A, Nishitani Y, Mikami B, Hashimoto W, Murata K. Structure of a Bacterial ABC Transporter Involved in the Import of an Acidic Polysaccharide Alginate. Structure. 2015 Jul 21. pii: S0969-2126(15)00274-9. doi:, 10.1016/j.str.2015.06.021. PMID:26235029 doi:http://dx.doi.org/10.1016/j.str.2015.06.021
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