Sandbox Reserved 1790

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 29: Line 29:
=== SHOC2 and PP1C ===
=== SHOC2 and PP1C ===
 +
<scene name='95/952717/Shoc2_and_pp1c/1'>Shoc2-PP1C</scene>
 +
<scene name='95/952717/Shoc2_and_pp1c/2'>SHOC2-PP1C Binding Pocket</scene>
PP1C binds to SHOC2 on its leucine rich region(LRR). Specifically, on two broad surfaces between LRR2 and LRR5 and between LRR7 and LRR11. Five main hydrogen bonds are made: E56-R182, E167-R203, E54-K180, R187-H178, R188-E155. The binding regions can also be shown as acidic and basic patches on <scene name='95/952718/Acid_base_pp1c/1'>PP1C</scene> and <scene name='95/952718/Acid_base_shoc2/1'>SHOC2</scene>. The corresponding patches interact to form a <scene name='95/952718/Acid_base_shoc2pp1c/1'>binary complex</scene>.
PP1C binds to SHOC2 on its leucine rich region(LRR). Specifically, on two broad surfaces between LRR2 and LRR5 and between LRR7 and LRR11. Five main hydrogen bonds are made: E56-R182, E167-R203, E54-K180, R187-H178, R188-E155. The binding regions can also be shown as acidic and basic patches on <scene name='95/952718/Acid_base_pp1c/1'>PP1C</scene> and <scene name='95/952718/Acid_base_shoc2/1'>SHOC2</scene>. The corresponding patches interact to form a <scene name='95/952718/Acid_base_shoc2pp1c/1'>binary complex</scene>.
 +
=== SHOC2 and MRAS ===
=== SHOC2 and MRAS ===
MRAS is initially bound to GDP causing it to be in its inactive state. This form cannot bind to the SHOC2-PP1C complex due to steric clashing. Once GDP is exchanged for GTP to activate the protein, conformational changed occur withing the switch I and switch II regions to allow MRAS to interact with SHOC2. These interactions include hydrogen bonds of and pi stacking. The primary hydrogen bonds are R288-Q71 and R177-E47. Pi staking occurs at R104-R83.
MRAS is initially bound to GDP causing it to be in its inactive state. This form cannot bind to the SHOC2-PP1C complex due to steric clashing. Once GDP is exchanged for GTP to activate the protein, conformational changed occur withing the switch I and switch II regions to allow MRAS to interact with SHOC2. These interactions include hydrogen bonds of and pi stacking. The primary hydrogen bonds are R288-Q71 and R177-E47. Pi staking occurs at R104-R83.

Revision as of 16:45, 6 April 2023

This page, as it appeared on March 17, 2023, was featured in this article in the journal Biochemistry and Molecular Biology Education.

SHOC2-PP1C-MRAS

SHOC2-MRAS-PP1C

Drag the structure with the mouse to rotate
Personal tools