4wr2

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==Crystal structure of a putative pyrimidine-specific ribonucleoside hydrolase (RihA) Protein from Shewanella loihica PV-4 (SHEW_0697, Target PSI-029635) with divalent cation and PEG 400 bound at the active site==
==Crystal structure of a putative pyrimidine-specific ribonucleoside hydrolase (RihA) Protein from Shewanella loihica PV-4 (SHEW_0697, Target PSI-029635) with divalent cation and PEG 400 bound at the active site==
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<StructureSection load='4wr2' size='340' side='right' caption='[[4wr2]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
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<StructureSection load='4wr2' size='340' side='right'caption='[[4wr2]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4wr2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Shelp Shelp]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4WR2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4WR2 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[4wr2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Shewanella_loihica_PV-4 Shewanella loihica PV-4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4WR2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4WR2 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=1PE:PENTAETHYLENE+GLYCOL'>1PE</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1PE:PENTAETHYLENE+GLYCOL'>1PE</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4wr2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4wr2 OCA], [https://pdbe.org/4wr2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4wr2 RCSB], [https://www.ebi.ac.uk/pdbsum/4wr2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4wr2 ProSAT]</span></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">rihA, Shew_0697 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=323850 SHELP])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4wr2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4wr2 OCA], [http://pdbe.org/4wr2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4wr2 RCSB], [http://www.ebi.ac.uk/pdbsum/4wr2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4wr2 ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/A3QAS1_SHELP A3QAS1_SHELP]] Hydrolyzes cytidine or uridine to ribose and cytosine or uracil, respectively.[HAMAP-Rule:MF_01431]
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[https://www.uniprot.org/uniprot/A3QAS1_SHELP A3QAS1_SHELP] Hydrolyzes cytidine or uridine to ribose and cytosine or uracil, respectively.[HAMAP-Rule:MF_01431]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Shelp]]
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[[Category: Large Structures]]
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[[Category: Almo, S C]]
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[[Category: Shewanella loihica PV-4]]
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[[Category: Bhosle, R]]
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[[Category: Almo SC]]
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[[Category: Bonanno, J B]]
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[[Category: Bhosle R]]
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[[Category: Celikgil, A]]
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[[Category: Bonanno JB]]
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[[Category: Chamala, S]]
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[[Category: Celikgil A]]
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[[Category: Chan, M K]]
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[[Category: Chamala S]]
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[[Category: Evans, B]]
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[[Category: Chan MK]]
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[[Category: Fiser, A]]
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[[Category: Evans B]]
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[[Category: Garforth, S]]
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[[Category: Fiser A]]
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[[Category: Gizzi, A]]
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[[Category: Garforth S]]
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[[Category: Hillerich, B]]
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[[Category: Gizzi A]]
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[[Category: Himmel, D M]]
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[[Category: Hillerich B]]
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[[Category: Kar, A]]
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[[Category: Himmel DM]]
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[[Category: Lafluer, J]]
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[[Category: Kar A]]
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[[Category: Lim, S]]
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[[Category: Lafluer J]]
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[[Category: Love, J]]
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[[Category: Lim S]]
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[[Category: Matikainen, B]]
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[[Category: Love J]]
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[[Category: Structural genomic]]
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[[Category: Matikainen B]]
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[[Category: Patel, H]]
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[[Category: Patel H]]
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[[Category: Seidel, R D]]
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[[Category: Seidel RD]]
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[[Category: Toro, R]]
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[[Category: Toro R]]
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[[Category: Villegas, G]]
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[[Category: Villegas G]]
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[[Category: Divalent cation binding site]]
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[[Category: Hydrolase]]
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[[Category: Nysgrc]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Pyrimidine-specific]]
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Revision as of 07:21, 7 April 2023

Crystal structure of a putative pyrimidine-specific ribonucleoside hydrolase (RihA) Protein from Shewanella loihica PV-4 (SHEW_0697, Target PSI-029635) with divalent cation and PEG 400 bound at the active site

PDB ID 4wr2

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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