Sandbox Reserved 1774

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== Molecular Structure and Function of TSHR ==
== Molecular Structure and Function of TSHR ==
=== Role of TSHR Domains ===
=== Role of TSHR Domains ===
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To understand how the structure of TSHR contributes to its function, it is helpful to become familiar with the three main domains of TSHR. First is the <scene name='95/952703/Tmd/14'>extracellular domain (ECD)</scene>, which is concave in shape. It is also called the <scene name='95/952703/Leucines_in_tmd/1'>leucine rich region (LRR)</scene> because it is made primarily of beta sheets which are rich in leucine <ref name="Kleinau">Kleinau G, Worth CL, Kreuchwig A, et al. Structural–Functional Features of the Thyrotropin Receptor: A Class A G-Protein-Coupled Receptor at Work. Frontiers in Endocrinology. 2017;8. Accessed April 2, 2023. [https://doi.org/10.3389/fendo.2017.00086 DOI: 10.3389/fendo.2017.00086]</ref>. The ECD contains <scene name='95/952703/Lysines_in_tmd/1'>lysine residues</scene> which play a key role in TSH binding. Second is the <scene name='95/952703/Tmd/15'>transmembrane domain (TMD) </scene>, which is composed of seven transmembrane alpha helices which are connected by extracellular loops (ECL). The TMD undergoes a conformation change upon ligand binding that activates the intracellular GPCR signal cascade <ref name="Duan" />. The third region of the TSHR is the <scene name='95/952703/Tmd/16'>hinge region</scene>, which plays a key role in the movement and stability of the TSHR. The details of the hinge mechanism are discussed in the proceeding section.
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To understand how the structure of TSHR contributes to its function, it is helpful to become familiar with the <scene name='95/952703/3_domains/1'>three main domains</scene> of TSHR. First is the <scene name='95/952703/Tmd/14'>extracellular domain (ECD)</scene>, which is concave in shape. It is also called the <scene name='95/952703/Leucines_in_tmd/2'>leucine rich region</scene> because it is made primarily of beta sheets which are rich in leucine <ref name="Kleinau">Kleinau G, Worth CL, Kreuchwig A, et al. Structural–Functional Features of the Thyrotropin Receptor: A Class A G-Protein-Coupled Receptor at Work. Frontiers in Endocrinology. 2017;8. Accessed April 2, 2023. [https://doi.org/10.3389/fendo.2017.00086 DOI: 10.3389/fendo.2017.00086]</ref>. The ECD contains <scene name='95/952703/Lysines_in_tmd/2'>lysine residues</scene> which play a key role in TSH binding. Second is the <scene name='95/952703/Tmd/15'>transmembrane domain (TMD) </scene>, which is composed of seven transmembrane alpha helices which are connected by extracellular loops (ECL). The TMD undergoes a conformation change upon ligand binding that activates the intracellular <scene name='95/952703/Gpcr/1'>GPCR</scene> signal cascade <ref name="Duan" />. The third region of the TSHR is the <scene name='95/952703/Tmd/16'>hinge region</scene>, which plays a key role in the movement and stability of the TSHR. The details of the hinge mechanism are discussed in the proceeding section.
[[Image:TSH Signaling.png|right|620 px|thumb|Figure 2: (Left) In the downright, inactive state, TSH cannot bind and no signaling activation occurs. (Right) In the upright, active state, binding of TSH leads to GPCR signaling activation and production of T3 and T4 hormones.]]
[[Image:TSH Signaling.png|right|620 px|thumb|Figure 2: (Left) In the downright, inactive state, TSH cannot bind and no signaling activation occurs. (Right) In the upright, active state, binding of TSH leads to GPCR signaling activation and production of T3 and T4 hormones.]]
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== Ligand Binding ==
== Ligand Binding ==
=== Binding of Thyroid Stimulating Hormone to TSHR===
=== Binding of Thyroid Stimulating Hormone to TSHR===
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The thyroid stimulating hormone <scene name='95/952703/Tsh-ecd/3'>binds to the extracellular domain</scene> by complementary shape<ref name="Duan" />. The ECD is curved and compliments the curvature of TSH similar to how a baseball fits into a glove. Several key ionic interactions between the TSH and TSHR also occur in the <scene name='95/952703/Seatbelt/3'>seat belt region of TSH</scene>. The seatbelt region is located in the beta subunit of the TSH. <scene name='95/952703/Tsh-tshr_itxn-3/4'>The first ionic interaction</scene> is Glu118 from TSH and Lys58 from the ECD.<scene name='95/952703/Tsh-tshr_itxn-2/3'>The second interaction</scene> is between Asp111 from the TSH and Lys209 from the ECD. These interactions form salt bridges between the ECD and the TSH which allows for specificity of binding for TSH to TSHR <ref name="Duan" /><ref name="Faust" />.
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The thyroid stimulating hormone <scene name='95/952703/Tsh-ecd/4'>binds to the extracellular domain</scene> by complementary shape<ref name="Duan" />. The ECD is curved and compliments the curvature of TSH similar to how a baseball fits into a glove. Several key ionic interactions between the TSH and TSHR also occur in the <scene name='95/952703/Seatbelt/4'>seat belt region of TSH</scene>. The seatbelt region is located in the beta subunit of the TSH. <scene name='95/952703/Tsh-tshr_itxn-3/5'>The first ionic interaction</scene> is Glu118 from TSH and Lys58 from the ECD.<scene name='95/952703/Tsh-tshr_itxn-2/4'>The second interaction</scene> is between Asp111 from the TSH and Lys209 from the ECD. These interactions form salt bridges between the ECD and the TSH which allows for specificity of binding for TSH to TSHR <ref name="Duan" /><ref name="Faust" />.
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Other key interactions that determine the specificity of binding are <scene name='95/952703/Tsh-tshr_itxn-4/3'>polar and nonpolar interactions</scene> between TSH and helix 1. Helix 1 contains several polar residues that interact with surrounding nonpolar residues like Leu62 and Phe17. Positively charged Arg54 was also seen to interact with Helix 1. These interactions increase the activation potency and help activate the push and pull mechanism of the hinge region <ref name="Duan" /><ref name="Faust" />.
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Other key interactions that determine the specificity of binding are <scene name='95/952703/Tsh-tshr_itxn-4/4'>polar and nonpolar interactions</scene> between TSH and helix 1. Helix 1 contains several polar residues that interact with surrounding nonpolar residues like Leu62 and Phe17. Positively charged Arg54 was also seen to interact with Helix 1. These interactions increase the activation potency and help activate the push and pull mechanism of the hinge region <ref name="Duan" /><ref name="Faust" />.
=== Ligand Regulation of Signaling Activation ===
=== Ligand Regulation of Signaling Activation ===

Revision as of 18:31, 15 April 2023

This Sandbox is Reserved from February 27 through August 31, 2023 for use in the course CH462 Biochemistry II taught by R. Jeremy Johnson at the Butler University, Indianapolis, USA. This reservation includes Sandbox Reserved 1765 through Sandbox Reserved 1795.
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