8c10

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'''Unreleased structure'''
 
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The entry 8c10 is ON HOLD until Paper Publication
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==Biochemical and structural characterisation of an alkaline family GH5 cellulase from a shipworm symbiont==
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<StructureSection load='8c10' size='340' side='right'caption='[[8c10]], [[Resolution|resolution]] 1.00&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[8c10]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Teredinibacter_waterburyi Teredinibacter waterburyi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8C10 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8C10 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8c10 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8c10 OCA], [https://pdbe.org/8c10 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8c10 RCSB], [https://www.ebi.ac.uk/pdbsum/8c10 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8c10 ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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BACKGROUND: Cellulases play a key role in the enzymatic conversion of plant cell-wall polysaccharides into simple and economically relevant sugars. Thus, the discovery of novel cellulases from exotic biological niches is of great interest as they may present properties that are valuable in the biorefining of lignocellulosic biomass. RESULTS: We have characterized a glycoside hydrolase 5 (GH5) domain of a bi-catalytic GH5-GH6 multi-domain enzyme from the unusual gill endosymbiont Teredinibacter waterburyi of the wood-digesting shipworm Psiloteredo megotara. The catalytic GH5 domain, was cloned and recombinantly produced with or without a C-terminal family 10 carbohydrate-binding module (CBM). Both variants showed hydrolytic endo-activity on soluble substrates such as beta-glucan, carboxymethylcellulose and konjac glucomannan, respectively. However, low activity was observed towards the crystalline form of cellulose. Interestingly, when co-incubated with a cellulose-active LPMO, a clear synergy was observed that boosted the overall hydrolysis of crystalline cellulose. The crystal structure of the GH5 catalytic domain was solved to 1.0 A resolution and revealed a substrate binding cleft extension containing a putative + 3 subsite, which is uncommon in this enzyme family. The enzyme was active in a wide range of pH, temperatures and showed high tolerance for NaCl. CONCLUSIONS: This study provides significant knowledge in the discovery of new enzymes from shipworm gill endosymbionts and sheds new light on biochemical and structural characterization of cellulolytic cellulase. Study demonstrated a boost in the hydrolytic activity of cellulase on crystalline cellulose when co-incubated with cellulose-active LPMO. These findings will be relevant for the development of future enzyme cocktails that may be useful for the biotechnological conversion of lignocellulose.
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Authors: Leiros, I., Vaaje-Kolstad, G.
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Biochemical and structural characterisation of a family GH5 cellulase from endosymbiont of shipworm P. megotara.,Junghare M, Manavalan T, Fredriksen L, Leiros I, Altermark B, Eijsink VGH, Vaaje-Kolstad G Biotechnol Biofuels Bioprod. 2023 Apr 4;16(1):61. doi: , 10.1186/s13068-023-02307-1. PMID:37016457<ref>PMID:37016457</ref>
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Description: Biochemical and structural characterisation of an alkaline family GH5 cellulase from a shipworm symbiont
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Leiros, I]]
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<div class="pdbe-citations 8c10" style="background-color:#fffaf0;"></div>
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[[Category: Vaaje-Kolstad, G]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Teredinibacter waterburyi]]
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[[Category: Leiros I]]
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[[Category: Vaaje-Kolstad G]]

Revision as of 09:25, 19 April 2023

Biochemical and structural characterisation of an alkaline family GH5 cellulase from a shipworm symbiont

PDB ID 8c10

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