8c0c

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 8c0c is ON HOLD until Paper Publication
+
==X-ray crystal structure of PPAR gamma ligand binding domain in complex with CZ46==
-
 
+
<StructureSection load='8c0c' size='340' side='right'caption='[[8c0c]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
Authors: Capelli, D., Montanari, R., Pochetti, G., Villa, S., Meneghetti, F.
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[8c0c]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8C0C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8C0C FirstGlance]. <br>
-
Description: X-ray crystal structure of PPAR gamma ligand binding domain in complex with CZ46
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=T0C:(2~{R})-2-[4-(naphthalen-1-ylmethoxy)phenyl]-4-oxidanyl-3-phenyl-2~{H}-furan-5-one'>T0C</scene></td></tr>
-
[[Category: Unreleased Structures]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8c0c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8c0c OCA], [https://pdbe.org/8c0c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8c0c RCSB], [https://www.ebi.ac.uk/pdbsum/8c0c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8c0c ProSAT]</span></td></tr>
-
[[Category: Capelli, D]]
+
</table>
-
[[Category: Meneghetti, F]]
+
== Disease ==
-
[[Category: Pochetti, G]]
+
[https://www.uniprot.org/uniprot/PPARG_HUMAN PPARG_HUMAN] Note=Defects in PPARG can lead to type 2 insulin-resistant diabetes and hyptertension. PPARG mutations may be associated with colon cancer. Defects in PPARG may be associated with susceptibility to obesity (OBESITY) [MIM:[https://omim.org/entry/601665 601665]. It is a condition characterized by an increase of body weight beyond the limitation of skeletal and physical requirements, as the result of excessive accumulation of body fat.<ref>PMID:9753710</ref> Defects in PPARG are the cause of familial partial lipodystrophy type 3 (FPLD3) [MIM:[https://omim.org/entry/604367 604367]. Familial partial lipodystrophies (FPLD) are a heterogeneous group of genetic disorders characterized by marked loss of subcutaneous (sc) fat from the extremities. Affected individuals show an increased preponderance of insulin resistance, diabetes mellitus and dyslipidemia.<ref>PMID:12453919</ref> <ref>PMID:11788685</ref> Genetic variations in PPARG can be associated with susceptibility to glioma type 1 (GLM1) [MIM:[https://omim.org/entry/137800 137800]. Gliomas are central nervous system neoplasms derived from glial cells and comprise astrocytomas, glioblastoma multiforme, oligodendrogliomas, and ependymomas. Note=Polymorphic PPARG alleles have been found to be significantly over-represented among a cohort of American patients with sporadic glioblastoma multiforme suggesting a possible contribution to disease susceptibility.
-
[[Category: Villa, S]]
+
== Function ==
-
[[Category: Montanari, R]]
+
[https://www.uniprot.org/uniprot/PPARG_HUMAN PPARG_HUMAN] Receptor that binds peroxisome proliferators such as hypolipidemic drugs and fatty acids. Once activated by a ligand, the receptor binds to a promoter element in the gene for acyl-CoA oxidase and activates its transcription. It therefore controls the peroxisomal beta-oxidation pathway of fatty acids. Key regulator of adipocyte differentiation and glucose homeostasis. Acts as a critical regulator of gut homeostasis by suppressing NF-kappa-B-mediated proinflammatory responses.<ref>PMID:9065481</ref> <ref>PMID:16150867</ref> <ref>PMID:20829347</ref>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Homo sapiens]]
 +
[[Category: Large Structures]]
 +
[[Category: Capelli D]]
 +
[[Category: Meneghetti F]]
 +
[[Category: Montanari R]]
 +
[[Category: Pochetti G]]
 +
[[Category: Villa S]]

Revision as of 17:04, 26 April 2023

X-ray crystal structure of PPAR gamma ligand binding domain in complex with CZ46

PDB ID 8c0c

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools