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| | <StructureSection load='4ye7' size='340' side='right'caption='[[4ye7]], [[Resolution|resolution]] 1.40Å' scene=''> | | <StructureSection load='4ye7' size='340' side='right'caption='[[4ye7]], [[Resolution|resolution]] 1.40Å' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[4ye7]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Cpgv Cpgv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YE7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4YE7 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4ye7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Cydia_pomonella_granulosis_virus_(isolate_Mexican) Cydia pomonella granulosis virus (isolate Mexican)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YE7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4YE7 FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ye7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ye7 OCA], [https://pdbe.org/4ye7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ye7 RCSB], [https://www.ebi.ac.uk/pdbsum/4ye7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ye7 ProSAT]</span></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">orf22 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=654905 CpGV])</td></tr>
| + | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ye7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ye7 OCA], [http://pdbe.org/4ye7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ye7 RCSB], [http://www.ebi.ac.uk/pdbsum/4ye7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ye7 ProSAT]</span></td></tr> | + | |
| | </table> | | </table> |
| - | <div style="background-color:#fffaf0;">
| + | == Function == |
| - | == Publication Abstract from PubMed == | + | [https://www.uniprot.org/uniprot/P87582_GVCPM P87582_GVCPM] |
| - | Macromolecular X-ray crystallography is routinely applied to understand biological processes at a molecular level. However, significant time and effort are still required to solve and complete many of these structures because of the need for manual interpretation of complex numerical data using many software packages and the repeated use of interactive three-dimensional graphics. PHENIX has been developed to provide a comprehensive system for macromolecular crystallographic structure solution with an emphasis on the automation of all procedures. This has relied on the development of algorithms that minimize or eliminate subjective input, the development of algorithms that automate procedures that are traditionally performed by hand and, finally, the development of a framework that allows a tight integration between the algorithms.
| + | |
| - | | + | |
| - | PHENIX: a comprehensive Python-based system for macromolecular structure solution.,Adams PD, Afonine PV, Bunkoczi G, Chen VB, Davis IW, Echols N, Headd JJ, Hung LW, Kapral GJ, Grosse-Kunstleve RW, McCoy AJ, Moriarty NW, Oeffner R, Read RJ, Richardson DC, Richardson JS, Terwilliger TC, Zwart PH Acta Crystallogr D Biol Crystallogr. 2010 Feb;66(Pt 2):213-21. Epub 2010, Jan 22. PMID:20124702<ref>PMID:20124702</ref>
| + | |
| - | | + | |
| - | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
| + | |
| - | </div>
| + | |
| - | <div class="pdbe-citations 4ye7" style="background-color:#fffaf0;"></div>
| + | |
| - | == References ==
| + | |
| - | <references/>
| + | |
| | __TOC__ | | __TOC__ |
| | </StructureSection> | | </StructureSection> |
| - | [[Category: Cpgv]] | |
| | [[Category: Large Structures]] | | [[Category: Large Structures]] |
| - | [[Category: Busby, J N]] | + | [[Category: Busby JN]] |
| - | [[Category: Metcalf, P]] | + | [[Category: Metcalf P]] |
| - | [[Category: Calyx]]
| + | |
| - | [[Category: Envelope]]
| + | |
| - | [[Category: Viral protein]]
| + | |
