This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4yyk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal structure of BRD9 Bromodomain bound to a crotonyllysine peptide==
==Crystal structure of BRD9 Bromodomain bound to a crotonyllysine peptide==
-
<StructureSection load='4yyk' size='340' side='right' caption='[[4yyk]], [[Resolution|resolution]] 1.79&Aring;' scene=''>
+
<StructureSection load='4yyk' size='340' side='right'caption='[[4yyk]], [[Resolution|resolution]] 1.79&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4yyk]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YYK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4YYK FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4yyk]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YYK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4YYK FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=KCR:N-6-CROTONYL-L-LYSINE'>KCR</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=KCR:N-6-CROTONYL-L-LYSINE'>KCR</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4yy4|4yy4]], [[4yy6|4yy6]], [[4yyd|4yyd]], [[4yyg|4yyg]], [[4yyh|4yyh]], [[4yyi|4yyi]], [[4yyj|4yyj]], [[4yym|4yym]], [[4yyn|4yyn]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4yyk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4yyk OCA], [https://pdbe.org/4yyk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4yyk RCSB], [https://www.ebi.ac.uk/pdbsum/4yyk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4yyk ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BRD9, UNQ3040/PRO9856 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4yyk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4yyk OCA], [http://pdbe.org/4yyk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4yyk RCSB], [http://www.ebi.ac.uk/pdbsum/4yyk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4yyk ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/BRD9_HUMAN BRD9_HUMAN]] May play a role in chromatin remodeling and regulation of transcription.
+
[https://www.uniprot.org/uniprot/BRD9_HUMAN BRD9_HUMAN] May play a role in chromatin remodeling and regulation of transcription.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 20: Line 18:
</div>
</div>
<div class="pdbe-citations 4yyk" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 4yyk" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Bromodomain-containing protein 3D structures|Bromodomain-containing protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Human]]
+
[[Category: Homo sapiens]]
-
[[Category: Bellon, S]]
+
[[Category: Large Structures]]
-
[[Category: Cochran, A G]]
+
[[Category: Bellon S]]
-
[[Category: Poy, F]]
+
[[Category: Cochran AG]]
-
[[Category: Tang, Y]]
+
[[Category: Poy F]]
-
[[Category: Bromodomain-crotonyllysine complex]]
+
[[Category: Tang Y]]
-
[[Category: Protein binding]]
+

Revision as of 07:31, 10 May 2023

Crystal structure of BRD9 Bromodomain bound to a crotonyllysine peptide

PDB ID 4yyk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4yyk"
Personal tools