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| <StructureSection load='4z9f' size='340' side='right'caption='[[4z9f]], [[Resolution|resolution]] 1.75Å' scene=''> | | <StructureSection load='4z9f' size='340' side='right'caption='[[4z9f]], [[Resolution|resolution]] 1.75Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[4z9f]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Corsp Corsp]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Z9F OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4Z9F FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[4z9f]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Corynebacterium_sp. Corynebacterium sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Z9F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4Z9F FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">hheA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1720 CORSP])</td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4z9f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4z9f OCA], [https://pdbe.org/4z9f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4z9f RCSB], [https://www.ebi.ac.uk/pdbsum/4z9f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4z9f ProSAT]</span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4z9f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4z9f OCA], [http://pdbe.org/4z9f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4z9f RCSB], [http://www.ebi.ac.uk/pdbsum/4z9f PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4z9f ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/Q46346_CORSP Q46346_CORSP] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Corsp]] | + | [[Category: Corynebacterium sp]] |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Noguchi, K]] | + | [[Category: Noguchi K]] |
- | [[Category: Odaka, M]] | + | [[Category: Odaka M]] |
- | [[Category: Ohtaki, A]] | + | [[Category: Ohtaki A]] |
- | [[Category: Watanabe, F]] | + | [[Category: Watanabe F]] |
- | [[Category: Yamanaka, Y]] | + | [[Category: Yamanaka Y]] |
- | [[Category: Yohda, M]] | + | [[Category: Yohda M]] |
- | [[Category: Yu, F]] | + | [[Category: Yu F]] |
- | [[Category: Lyase]]
| + | |
| Structural highlights
Function
Q46346_CORSP
Publication Abstract from PubMed
Halohydrin hydrogen-halide-lyase (H-Lyase) is a bacterial enzyme that is involved in the degradation of halohydrins. This enzyme catalyzes the intramolecular nucleophilic displacement of a halogen by a vicinal hydroxyl group in halohydrins to produce the corresponding epoxides. The epoxide products are subsequently hydrolyzed by an epoxide hydrolase, yielding the corresponding 1, 2-diol. Until now, six different H-Lyases have been studied. These H-Lyases are grouped into three subtypes (A, B, and C) based on amino acid sequence similarities and exhibit different enantioselectivity. Corynebacterium sp. strain N-1074 has two different isozymes of H-Lyase, HheA (A-type) and HheB (B-type). We have determined their crystal structures to elucidate the differences in enantioselectivity among them. All three groups share a similar structure, including catalytic sites. The lack of enantioselectivity of HheA seems to be due to the relatively wide size of the substrate tunnel compared to that of other H-Lyases. Among the B-type H-Lyases, HheB shows relatively high enantioselectivity compared to that of HheBGP1 . This difference seems to be due to amino acid replacements at the active site tunnel. The binding mode of 1, 3-dicyano-2-propanol at the catalytic site in the crystal structure of the HheB-DiCN complex suggests that the product should be (R)-epichlorohydrin, which agrees with the enantioselectivity of HheB. Comparison with the structure of HheC provides a clue for the difference in their enantioselectivity. Proteins 2015; 83:2230-2239. (c) 2015 Wiley Periodicals, Inc.
Crystal structures of halohydrin hydrogen-halide-lyases from Corynebacterium sp. N-1074.,Watanabe F, Yu F, Ohtaki A, Yamanaka Y, Noguchi K, Yohda M, Odaka M Proteins. 2015 Dec;83(12):2230-9. doi: 10.1002/prot.24938. Epub 2015 Oct 16. PMID:26422370[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Watanabe F, Yu F, Ohtaki A, Yamanaka Y, Noguchi K, Yohda M, Odaka M. Crystal structures of halohydrin hydrogen-halide-lyases from Corynebacterium sp. N-1074. Proteins. 2015 Dec;83(12):2230-9. doi: 10.1002/prot.24938. Epub 2015 Oct 16. PMID:26422370 doi:http://dx.doi.org/10.1002/prot.24938
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