1ksh

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[[Image:1ksh.gif|left|200px]]
[[Image:1ksh.gif|left|200px]]
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{{Structure
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<!--
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|PDB= 1ksh |SIZE=350|CAPTION= <scene name='initialview01'>1ksh</scene>, resolution 1.80&Aring;
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The line below this paragraph, containing "STRUCTURE_1ksh", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=CME:S,S-(2-HYDROXYETHYL)THIOCYSTEINE'>CME</scene>, <scene name='pdbligand=GDP:GUANOSINE-5&#39;-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/3',5'-cyclic-nucleotide_phosphodiesterase 3',5'-cyclic-nucleotide phosphodiesterase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.4.17 3.1.4.17] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE= ARL2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 Mus musculus]), PDE6D or PDED ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
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-->
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|DOMAIN=
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{{STRUCTURE_1ksh| PDB=1ksh | SCENE= }}
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|RELATEDENTRY=[[1ksg|1KSG]], [[1ksj|1KSJ]], [[1fzq|1fzq]], [[1doa|1doa]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ksh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ksh OCA], [http://www.ebi.ac.uk/pdbsum/1ksh PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ksh RCSB]</span>
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}}
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'''Complex of Arl2 and PDE delta, Crystal Form 2 (native)'''
'''Complex of Arl2 and PDE delta, Crystal Form 2 (native)'''
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[[Category: Roversi, P.]]
[[Category: Roversi, P.]]
[[Category: Wittinghofer, A.]]
[[Category: Wittinghofer, A.]]
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[[Category: arf family]]
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[[Category: Arf family]]
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[[Category: effector molecule]]
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[[Category: Effector molecule]]
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[[Category: gdi]]
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[[Category: Gdi]]
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[[Category: immunoglobuline-like fold]]
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[[Category: Immunoglobuline-like fold]]
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[[Category: small gtp-binding protein]]
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[[Category: Small gtp-binding protein]]
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[[Category: small gtpase]]
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[[Category: Small gtpase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 23:06:55 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 21:52:54 2008''
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Revision as of 20:06, 2 May 2008

Template:STRUCTURE 1ksh

Complex of Arl2 and PDE delta, Crystal Form 2 (native)


Overview

Arf-like (Arl) proteins are close relatives of the Arf regulators of vesicular transport, but their function is unknown. Here, we present the crystal structure of full-length Arl2-GTP in complex with its effector PDE delta solved in two crystal forms (Protein Data Bank codes 1KSG, 1KSH and 1KSJ). Arl2 shows a dramatic conformational change from the GDP-bound form, which suggests that it is reversibly membrane associated. PDE delta is structurally closely related to RhoGDI and contains a deep empty hydrophobic pocket. Further experiments show that H-Ras, Rheb, Rho6 and G alpha(i1) interact with PDE delta and that, at least for H-Ras, the intact C-terminus is required. We suggest PDE delta to be a specific soluble transport factor for certain prenylated proteins and Arl2-GTP a regulator of PDE delta-mediated transport.

About this Structure

1KSH is a Protein complex structure of sequences from Homo sapiens and Mus musculus. Full crystallographic information is available from OCA.

Reference

The complex of Arl2-GTP and PDE delta: from structure to function., Hanzal-Bayer M, Renault L, Roversi P, Wittinghofer A, Hillig RC, EMBO J. 2002 May 1;21(9):2095-106. PMID:11980706 Page seeded by OCA on Fri May 2 23:06:55 2008

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