1ksr

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:1ksr.gif|left|200px]]
[[Image:1ksr.gif|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 1ksr |SIZE=350|CAPTION= <scene name='initialview01'>1ksr</scene>
+
The line below this paragraph, containing "STRUCTURE_1ksr", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND=
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY=
+
or leave the SCENE parameter empty for the default display.
-
|GENE= ABPC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=44689 Dictyostelium discoideum])
+
-->
-
|DOMAIN=
+
{{STRUCTURE_1ksr| PDB=1ksr | SCENE= }}
-
|RELATEDENTRY=
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ksr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ksr OCA], [http://www.ebi.ac.uk/pdbsum/1ksr PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ksr RCSB]</span>
+
-
}}
+
'''THE REPEATING SEGMENTS OF THE F-ACTIN CROSS-LINKING GELATION FACTOR (ABP-120) HAVE AN IMMUNOGLOBULIN FOLD, NMR, 20 STRUCTURES'''
'''THE REPEATING SEGMENTS OF THE F-ACTIN CROSS-LINKING GELATION FACTOR (ABP-120) HAVE AN IMMUNOGLOBULIN FOLD, NMR, 20 STRUCTURES'''
Line 30: Line 27:
[[Category: Noegel, A A.]]
[[Category: Noegel, A A.]]
[[Category: Renner, C.]]
[[Category: Renner, C.]]
-
[[Category: abp-120]]
+
[[Category: Abp-120]]
-
[[Category: actin binding protein]]
+
[[Category: Actin binding protein]]
-
[[Category: gelation factor]]
+
[[Category: Gelation factor]]
-
[[Category: immunoglobulin]]
+
[[Category: Immunoglobulin]]
-
[[Category: structure]]
+
[[Category: Structure]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 23:07:38 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 21:53:02 2008''
+

Revision as of 20:07, 2 May 2008

Template:STRUCTURE 1ksr

THE REPEATING SEGMENTS OF THE F-ACTIN CROSS-LINKING GELATION FACTOR (ABP-120) HAVE AN IMMUNOGLOBULIN FOLD, NMR, 20 STRUCTURES


Overview

The 120,000 M(r) gelation factor and alpha-actinin are among the most abundant F-actin cross-linking proteins in Dictyostelium discoideum. Both molecules are rod-shaped homodimers. Each monomer chain is comprised of an actin-binding domain and a rod domain. The rod domain of the gelation factor consists of six 100-residue repetitive segments with high internal homology. We have now determined the three-dimensional structure of segment 4 of the rod domain of the gelation factor from D. discoideum using NMR spectroscopy. The segment consists of seven beta-sheets arranged in an immunoglobulin-like (Ig) fold. This is completely different from the alpha-actinin rod domain which consists of four spectrin-like alpha-helical segments. The gelation factor is the first example of an Ig-fold found in an actin-binding protein. Two highly homologous actin-binding proteins from human with similar sequences to the gelation factor, filamin and a 280,000 M(r) actin-binding protein (ABP-280), share conserved residues that form the core of the gelation factor repetitive segment structure. Thus, the segment 4 structure should be common to this subfamily of the spectrin superfamily. The structure of segment 4 together with previously published electron microscopy data, provide an explanation for the dimerization of the whole gelation factor molecule.

About this Structure

1KSR is a Single protein structure of sequence from Dictyostelium discoideum. Full crystallographic information is available from OCA.

Reference

The repeating segments of the F-actin cross-linking gelation factor (ABP-120) have an immunoglobulin-like fold., Fucini P, Renner C, Herberhold C, Noegel AA, Holak TA, Nat Struct Biol. 1997 Mar;4(3):223-30. PMID:9164464 Page seeded by OCA on Fri May 2 23:07:38 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools