This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5aj4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:03, 25 May 2023) (edit) (undo)
 
Line 3: Line 3:
<SX load='5aj4' size='340' side='right' viewer='molstar' caption='[[5aj4]], [[Resolution|resolution]] 3.80&Aring;' scene=''>
<SX load='5aj4' size='340' side='right' viewer='molstar' caption='[[5aj4]], [[Resolution|resolution]] 3.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5aj4]] is a 89 chain structure with sequence from [http://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5AJ4 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5AJ4 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5aj4]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5AJ4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5AJ4 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=P5P:PURINE+RIBOSIDE-5-MONOPHOSPHATE'>P5P</scene>, <scene name='pdbligand=Y5P:1-(5-O-PHOSPHONO-BETA-D-RIBOFURANOSYL)-1,4-DIHYDROPYRIMIDINE'>Y5P</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=P5P:PURINE+RIBOSIDE-5-MONOPHOSPHATE'>P5P</scene>, <scene name='pdbligand=UNK:UNKNOWN'>UNK</scene>, <scene name='pdbligand=Y5P:1-(5-O-PHOSPHONO-BETA-D-RIBOFURANOSYL)-1,4-DIHYDROPYRIMIDINE'>Y5P</scene></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5aj4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5aj4 OCA], [https://pdbe.org/5aj4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5aj4 RCSB], [https://www.ebi.ac.uk/pdbsum/5aj4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5aj4 ProSAT]</span></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5aj3|5aj3]], [[4v19|4v19]], [[4v1a|4v1a]]</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5aj4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5aj4 OCA], [http://pdbe.org/5aj4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5aj4 RCSB], [http://www.ebi.ac.uk/pdbsum/5aj4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5aj4 ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/F1S001_PIG F1S001_PIG]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 28: Line 28:
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Sus scrofa]]
[[Category: Sus scrofa]]
-
[[Category: Aebersold, R]]
+
[[Category: Aebersold R]]
-
[[Category: Ban, N]]
+
[[Category: Ban N]]
-
[[Category: Bieri, P]]
+
[[Category: Bieri P]]
-
[[Category: Boehringer, D]]
+
[[Category: Boehringer D]]
-
[[Category: Greber, B J]]
+
[[Category: Greber BJ]]
-
[[Category: Leibundgut, M]]
+
[[Category: Leibundgut M]]
-
[[Category: Leitner, A]]
+
[[Category: Leitner A]]
-
[[Category: 28s small subunit]]
+
-
[[Category: 39s large subunit]]
+
-
[[Category: Cryo- em]]
+
-
[[Category: Decoding center]]
+
-
[[Category: Mammalian 55s mitochondrial ribosome]]
+
-
[[Category: Mammalian 55s mitoribosome]]
+
-
[[Category: Mitochondria]]
+
-
[[Category: Mrna]]
+
-
[[Category: Ptc]]
+
-
[[Category: Ribosome]]
+
-
[[Category: Single particle analysis]]
+
-
[[Category: Translation]]
+
-
[[Category: Trna]]
+

Current revision

Structure of the 55S mammalian mitoribosome.

5aj4, resolution 3.80Å

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5aj4"
Personal tools