1kya

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[[Image:1kya.gif|left|200px]]
[[Image:1kya.gif|left|200px]]
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{{Structure
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|PDB= 1kya |SIZE=350|CAPTION= <scene name='initialview01'>1kya</scene>, resolution 2.40&Aring;
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The line below this paragraph, containing "STRUCTURE_1kya", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PYE:TETRAHYDROPYRAN'>PYE</scene>, <scene name='pdbligand=XYD:2,5-DIMETHYLANILINE'>XYD</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Laccase Laccase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.10.3.2 1.10.3.2] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE=
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{{STRUCTURE_1kya| PDB=1kya | SCENE= }}
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|RELATEDENTRY=
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1kya FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1kya OCA], [http://www.ebi.ac.uk/pdbsum/1kya PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1kya RCSB]</span>
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'''ACTIVE LACCASE FROM TRAMETES VERSICOLOR COMPLEXED WITH 2,5-XYLIDINE'''
'''ACTIVE LACCASE FROM TRAMETES VERSICOLOR COMPLEXED WITH 2,5-XYLIDINE'''
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[[Category: Madzak, C.]]
[[Category: Madzak, C.]]
[[Category: Mougin, C.]]
[[Category: Mougin, C.]]
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[[Category: blue-copper]]
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[[Category: Blue-copper]]
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[[Category: oxidoreductase]]
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[[Category: Oxidoreductase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 23:19:13 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 21:55:21 2008''
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Revision as of 20:19, 2 May 2008

Template:STRUCTURE 1kya

ACTIVE LACCASE FROM TRAMETES VERSICOLOR COMPLEXED WITH 2,5-XYLIDINE


Overview

Laccases are multicopper oxidases that catalyze the oxidation of a wide range of phenols or arylamines, and their use in industrial oxidative processes is increasing. We purified from the white rot fungus Trametes versicolor a laccase that exists as five different isozymes, depending on glycosylation. The 2.4 A resolution structure of the most abundant isozyme of the glycosylated enzyme was solved. The four copper atoms are present, and it is the first crystal structure of a laccase in its active form. The crystallized enzyme binds 2,5-xylidine, which was used as a laccase inducer in the fungus culture. This arylamine is a very weak reducing substrate of the enzyme. The cavity enclosing 2,5-xylidine is rather wide, allowing the accommodation of substrates of various sizes. Several amino acid residues make hydrophobic interactions with the aromatic ring of the ligand. In addition, two charged or polar residues interact with its amino group. The first one is an histidine that also coordinates the copper that functions as the primary electron acceptor. The second is an aspartate conserved among fungal laccases. The purified enzyme can oxidize various hydroxylated compounds of the phenylurea family of herbicides that we synthesized. These phenolic substrates have better affinities at pH 5 than at pH 3, which could be related to the 2,5-xylidine binding by the aspartate. This is the first high-resolution structure of a multicopper oxidase complexed to a reducing substrate. It provides a model for engineering laccases that are either more efficient or with a wider substrate specificity.

About this Structure

1KYA is a Single protein structure of sequence from Trametes versicolor. Full crystallographic information is available from OCA.

Reference

Crystal structure of a four-copper laccase complexed with an arylamine: insights into substrate recognition and correlation with kinetics., Bertrand T, Jolivalt C, Briozzo P, Caminade E, Joly N, Madzak C, Mougin C, Biochemistry. 2002 Jun 11;41(23):7325-33. PMID:12044164 Page seeded by OCA on Fri May 2 23:19:13 2008

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