3pmv
From Proteopedia
(Difference between revisions)
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<StructureSection load='3pmv' size='340' side='right'caption='[[3pmv]], [[Resolution|resolution]] 1.80Å' scene=''> | <StructureSection load='3pmv' size='340' side='right'caption='[[3pmv]], [[Resolution|resolution]] 1.80Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[3pmv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3pmv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PMV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PMV FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=557:N-[(2S)-2-{4-[4-(HYDROXYMETHYL)-3-(TRIFLUOROMETHYL)-1H-PYRAZOL-1-YL]PHENYL}PROPYL]PROPANE-2-SULFONAMIDE'>557</scene>, <scene name='pdbligand=GLU:GLUTAMIC+ACID'>GLU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=557:N-[(2S)-2-{4-[4-(HYDROXYMETHYL)-3-(TRIFLUOROMETHYL)-1H-PYRAZOL-1-YL]PHENYL}PROPYL]PROPANE-2-SULFONAMIDE'>557</scene>, <scene name='pdbligand=GLU:GLUTAMIC+ACID'>GLU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3o28|3o28]], [[3o29|3o29]], [[3o2a|3o2a]], [[3o6g|3o6g]], [[3o6h|3o6h]], [[3o6i|3o6i]], [[3pmw|3pmw]], [[3pmx|3pmx]]</div></td></tr> | ||
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Gria2, Glur2 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10116 Buffalo rat])</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3pmv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pmv OCA], [https://pdbe.org/3pmv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3pmv RCSB], [https://www.ebi.ac.uk/pdbsum/3pmv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3pmv ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3pmv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pmv OCA], [https://pdbe.org/3pmv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3pmv RCSB], [https://www.ebi.ac.uk/pdbsum/3pmv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3pmv ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
- | + | [https://www.uniprot.org/uniprot/GRIA2_RAT GRIA2_RAT] Receptor for glutamate that functions as ligand-gated ion channel in the central nervous system and plays an important role in excitatory synaptic transmission. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. Binding of the excitatory neurotransmitter L-glutamate induces a conformation change, leading to the opening of the cation channel, and thereby converts the chemical signal to an electrical impulse. The receptor then desensitizes rapidly and enters a transient inactive state, characterized by the presence of bound agonist. In the presence of CACNG4 or CACNG7 or CACNG8, shows resensitization which is characterized by a delayed accumulation of current flux upon continued application of glutamate.<ref>PMID:9351977</ref> <ref>PMID:19265014</ref> <ref>PMID:21172611</ref> <ref>PMID:12501192</ref> <ref>PMID:12015593</ref> <ref>PMID:12872125</ref> <ref>PMID:12730367</ref> <ref>PMID:16192394</ref> <ref>PMID:15591246</ref> <ref>PMID:17018279</ref> <ref>PMID:16483599</ref> <ref>PMID:19946266</ref> <ref>PMID:21317873</ref> <ref>PMID:21846932</ref> | |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: Buffalo rat]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Brown | + | [[Category: Rattus norvegicus]] |
- | [[Category: Campbell | + | [[Category: Brown CI]] |
- | [[Category: Gillen | + | [[Category: Campbell RA]] |
- | [[Category: Gillespie | + | [[Category: Gillen KJ]] |
- | [[Category: Jamieson | + | [[Category: Gillespie J]] |
- | [[Category: Kazemier | + | [[Category: Jamieson C]] |
- | [[Category: Kiczun | + | [[Category: Kazemier B]] |
- | [[Category: Lamont | + | [[Category: Kiczun M]] |
- | [[Category: Lyons | + | [[Category: Lamont Y]] |
- | [[Category: Maclean | + | [[Category: Lyons AJ]] |
- | [[Category: Moir | + | [[Category: Maclean JKF]] |
- | [[Category: Morrow | + | [[Category: Moir EM]] |
- | [[Category: Pantling | + | [[Category: Morrow JA]] |
- | [[Category: Rankovic | + | [[Category: Pantling J]] |
- | [[Category: Smith | + | [[Category: Rankovic Z]] |
- | + | [[Category: Smith L]] | |
- | + | ||
- | + | ||
- | + |
Revision as of 05:48, 31 May 2023
Ligand-binding domain of GluA2 (flip) ionotropic glutamate receptor in complex with an allosteric modulator
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Categories: Large Structures | Rattus norvegicus | Brown CI | Campbell RA | Gillen KJ | Gillespie J | Jamieson C | Kazemier B | Kiczun M | Lamont Y | Lyons AJ | Maclean JKF | Moir EM | Morrow JA | Pantling J | Rankovic Z | Smith L