This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5b6v

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 3: Line 3:
<StructureSection load='5b6v' size='340' side='right'caption='[[5b6v]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='5b6v' size='340' side='right'caption='[[5b6v]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5b6v]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Halsa Halsa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5B6V OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5B6V FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5b6v]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Halobacterium_salinarum_NRC-1 Halobacterium salinarum NRC-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5B6V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5B6V FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=C14:TETRADECANE'>C14</scene>, <scene name='pdbligand=D10:DECANE'>D10</scene>, <scene name='pdbligand=DD9:NONANE'>DD9</scene>, <scene name='pdbligand=HP6:HEPTANE'>HP6</scene>, <scene name='pdbligand=L2P:2,3-DI-PHYTANYL-GLYCEROL'>L2P</scene>, <scene name='pdbligand=MYS:PENTADECANE'>MYS</scene>, <scene name='pdbligand=OCT:N-OCTANE'>OCT</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene>, <scene name='pdbligand=TRD:TRIDECANE'>TRD</scene>, <scene name='pdbligand=UND:UNDECANE'>UND</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C14:TETRADECANE'>C14</scene>, <scene name='pdbligand=D10:DECANE'>D10</scene>, <scene name='pdbligand=DD9:NONANE'>DD9</scene>, <scene name='pdbligand=HP6:HEPTANE'>HP6</scene>, <scene name='pdbligand=L2P:2,3-DI-PHYTANYL-GLYCEROL'>L2P</scene>, <scene name='pdbligand=MYS:PENTADECANE'>MYS</scene>, <scene name='pdbligand=OCT:N-OCTANE'>OCT</scene>, <scene name='pdbligand=RET:RETINAL'>RET</scene>, <scene name='pdbligand=TRD:TRIDECANE'>TRD</scene>, <scene name='pdbligand=UND:UNDECANE'>UND</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5b6w|5b6w]], [[5b6x|5b6x]], [[5b6y|5b6y]], [[5b6z|5b6z]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5b6v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5b6v OCA], [https://pdbe.org/5b6v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5b6v RCSB], [https://www.ebi.ac.uk/pdbsum/5b6v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5b6v ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5b6v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5b6v OCA], [http://pdbe.org/5b6v PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5b6v RCSB], [http://www.ebi.ac.uk/pdbsum/5b6v PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5b6v ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/BACR_HALSA BACR_HALSA]] Light-driven proton pump.
+
[https://www.uniprot.org/uniprot/BACR_HALSA BACR_HALSA] Light-driven proton pump.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 26: Line 25:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Halsa]]
+
[[Category: Halobacterium salinarum NRC-1]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Arima, T]]
+
[[Category: Arima T]]
-
[[Category: Iwata, S]]
+
[[Category: Iwata S]]
-
[[Category: Nakane, T]]
+
[[Category: Nakane T]]
-
[[Category: Nango, E]]
+
[[Category: Nango E]]
-
[[Category: Neutze, R]]
+
[[Category: Neutze R]]
-
[[Category: Royant, A]]
+
[[Category: Royant A]]
-
[[Category: Tanaka, T]]
+
[[Category: Tanaka T]]
-
[[Category: Bacteriorhodopsin]]
+
-
[[Category: Proton transport]]
+
-
[[Category: Sacla]]
+
-
[[Category: Time-resolved sfx]]
+
-
[[Category: Xfel]]
+

Revision as of 06:40, 31 May 2023

A three dimensional movie of structural changes in bacteriorhodopsin: resting state structure

PDB ID 5b6v

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5b6v"
Personal tools