5b7j

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==Structure model of Sap1-DNA complex==
==Structure model of Sap1-DNA complex==
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<StructureSection load='5b7j' size='340' side='right'caption='[[5b7j]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
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<StructureSection load='5b7j' size='340' side='right'caption='[[5b7j]]' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5b7j]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Fission_yeast Fission yeast]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5B7J OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5B7J FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5b7j]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Schizosaccharomyces_pombe Schizosaccharomyces pombe] and [https://en.wikipedia.org/wiki/Schizosaccharomyces_pombe_972h- Schizosaccharomyces pombe 972h-]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5B7J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5B7J FirstGlance]. <br>
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</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">sap1, SPCC1672.02c ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=284812 Fission yeast])</td></tr>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5b7j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5b7j OCA], [https://pdbe.org/5b7j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5b7j RCSB], [https://www.ebi.ac.uk/pdbsum/5b7j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5b7j ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5b7j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5b7j OCA], [http://pdbe.org/5b7j PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5b7j RCSB], [http://www.ebi.ac.uk/pdbsum/5b7j PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5b7j ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/SAP1_SCHPO SAP1_SCHPO]] Binds to sequences required for mating-type switching. Makes a simultaneous contact with both the alpha and beta domains of the switch-activating site SAS1. Also binds to replication fork barrier 1 (RFB1) located within a 78 base pair sequence near the 3' end of the rRNA coding region. This leads to replication fork blockage. It binds the consensus sequence 5'-TA[AG]GCAGNTN[CT]AACG[AC]G-3'. Has a role in chromosome organization and integrity where it is involved in chromosome segregation. Has a role in sister chromatid cohesion and condensation.
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[https://www.uniprot.org/uniprot/SAP1_SCHPO SAP1_SCHPO] Binds to sequences required for mating-type switching. Makes a simultaneous contact with both the alpha and beta domains of the switch-activating site SAS1. Also binds to replication fork barrier 1 (RFB1) located within a 78 base pair sequence near the 3' end of the rRNA coding region. This leads to replication fork blockage. It binds the consensus sequence 5'-TA[AG]GCAGNTN[CT]AACG[AC]G-3'. Has a role in chromosome organization and integrity where it is involved in chromosome segregation. Has a role in sister chromatid cohesion and condensation.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Fission yeast]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Ding, J]]
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[[Category: Schizosaccharomyces pombe]]
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[[Category: Hu, Y]]
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[[Category: Schizosaccharomyces pombe 972h-]]
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[[Category: Jin, C]]
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[[Category: Ding J]]
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[[Category: Zhang, Y]]
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[[Category: Hu Y]]
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[[Category: Complex]]
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[[Category: Jin C]]
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[[Category: Dna]]
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[[Category: Zhang Y]]
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[[Category: Dna binding protein-dna complex]]
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[[Category: Interaction]]
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[[Category: Protein]]
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Revision as of 06:41, 31 May 2023

Structure model of Sap1-DNA complex

PDB ID 5b7j

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