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| <StructureSection load='5btw' size='340' side='right'caption='[[5btw]], [[Resolution|resolution]] 1.20Å' scene=''> | | <StructureSection load='5btw' size='340' side='right'caption='[[5btw]], [[Resolution|resolution]] 1.20Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[5btw]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Legph Legph]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5BTW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5BTW FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5btw]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 Legionella pneumophila subsp. pneumophila str. Philadelphia 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5BTW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5BTW FirstGlance]. <br> |
- | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lpg1496 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272624 LEGPH])</td></tr> | + | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5btw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5btw OCA], [https://pdbe.org/5btw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5btw RCSB], [https://www.ebi.ac.uk/pdbsum/5btw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5btw ProSAT]</span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5btw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5btw OCA], [http://pdbe.org/5btw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5btw RCSB], [http://www.ebi.ac.uk/pdbsum/5btw PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5btw ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/Q5ZVE4_LEGPH Q5ZVE4_LEGPH] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| </StructureSection> | | </StructureSection> |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Legph]] | + | [[Category: Legionella pneumophila subsp. pneumophila str. Philadelphia 1]] |
- | [[Category: Structural genomic]]
| + | [[Category: Gehring K]] |
- | [[Category: Gehring, K]] | + | [[Category: Kozlov G]] |
- | [[Category: Kozlov, G]] | + | [[Category: Wong K]] |
- | [[Category: Wong, K]] | + | |
- | [[Category: Alpha-beta fold]]
| + | |
- | [[Category: Bacterial effector]]
| + | |
- | [[Category: Bsgi]]
| + | |
- | [[Category: Nucleotide-binding]]
| + | |
- | [[Category: Unknown function]]
| + | |
| Structural highlights
Function
Q5ZVE4_LEGPH
Publication Abstract from PubMed
Pathogenic gram-negative bacteria use specialized secretion systems that translocate bacterial proteins, termed effectors, directly into host cells where they interact with host proteins and biochemical processes for the benefit of the pathogen. Lpg1496 is a previously uncharacterized effector of Legionella pneumophila, the causative agent of Legionnaire's disease. Here, we crystallized three nucleotide-binding domains from lpg1496. The C-terminal domain, which is conserved among the SidE family of effectors, is formed of two largely alpha-helical lobes with a nucleotide-binding cleft. A structural homology search has shown similarity to phosphodiesterases involved in cleavage of cyclic nucleotides. We have also crystallized a novel domain that occurs twice in the N-terminal half of the protein that we term KLAMP domains due to the presence of homologous domains in bacterial histidine kinase-like ATP-binding region-containing proteins and S-adenosylmethionine-dependent methyltransferase proteins. Both KLAMP structures are very similar but selectively bind 3',5'-cAMP and ADP. A co-crystal of the KLAMP1 domain with 3',5'-cAMP reveals the contribution of Tyr61 and Tyr69 that produce pi-stacking interactions with the adenine ring of the nucleotide. Our study provides the first structural insights into two novel nucleotide-binding domains associated with bacterial virulence.
Structure of the Legionella Effector, lpg1496, Suggests a Role in Nucleotide Metabolism.,Wong K, Kozlov G, Zhang Y, Gehring K J Biol Chem. 2015 Aug 20. pii: jbc.M115.671263. PMID:26294765[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Wong K, Kozlov G, Zhang Y, Gehring K. Structure of the Legionella Effector, lpg1496, Suggests a Role in Nucleotide Metabolism. J Biol Chem. 2015 Aug 20. pii: jbc.M115.671263. PMID:26294765 doi:http://dx.doi.org/10.1074/jbc.M115.671263
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