This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5c9l

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:25, 7 June 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5c9l' size='340' side='right'caption='[[5c9l]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
<StructureSection load='5c9l' size='340' side='right'caption='[[5c9l]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5c9l]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Photorhabdus_luminescens Photorhabdus luminescens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5C9L OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5C9L FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5c9l]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Photorhabdus_luminescens Photorhabdus luminescens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5C9L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5C9L FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5c9l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5c9l OCA], [http://pdbe.org/5c9l PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5c9l RCSB], [http://www.ebi.ac.uk/pdbsum/5c9l PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5c9l ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5c9l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5c9l OCA], [https://pdbe.org/5c9l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5c9l RCSB], [https://www.ebi.ac.uk/pdbsum/5c9l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5c9l ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q7N8J0_PHOLL Q7N8J0_PHOLL]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 24:
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Photorhabdus luminescens]]
[[Category: Photorhabdus luminescens]]
-
[[Category: Demo, G]]
+
[[Category: Demo G]]
-
[[Category: Dobes, P]]
+
[[Category: Dobes P]]
-
[[Category: Hyrsl, P]]
+
[[Category: Hyrsl P]]
-
[[Category: Kumar, A]]
+
[[Category: Kumar A]]
-
[[Category: Sykorova, P]]
+
[[Category: Sykorova P]]
-
[[Category: Wimmerova, M]]
+
[[Category: Wimmerova M]]
-
[[Category: Fucose-specific]]
+
-
[[Category: Lectin]]
+
-
[[Category: Seven-bladed beta-propeller]]
+
-
[[Category: Sugar binding protein]]
+

Current revision

Crystal structure of native PLL lectin from Photorhabdus luminescens at 1.65 A resolution

PDB ID 5c9l

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools