5fzv

From Proteopedia

(Difference between revisions)

Revision as of 10:09, 14 June 2023

High resolution solution NMR structure of the spider venom peptide U3- scytotoxin-Sth1a

Structural highlights

5fzv is a 1 chain structure with sequence from Scytodes thoracica. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

U31A_SCYTH Probable insect neurotoxin with ion channel impairing activity (Probable). Does not show activity on 45 human receptors from 9 families (5-hydroxytryptamine, adrenergic, dopamine, muscarinic, histamine, neurotransmitter, opioid, sigma, and gaba(A) receptors) (PubMed:27227898). In vivo, does not cause paralytic or lethal activity when injected into sheep blowflies (PubMed:27227898). When mixed with U3-SYTX-Sth1h does not cause paralytic or lethal activity when injected into crickets (PubMed:27227898). It is noteworthy that both sheep blowflies and crickets are evolutionarily distant from prey species (PubMed:27227898).^[1]

Publication Abstract from PubMed

We present the solution-state NMR structures and preliminary functional characterizations of three venom peptides identified from the spitting spider Scytodes thoracica. Despite little sequence identity to other venom peptides, structural characterization reveals that these peptides contain an inhibitor cystine knot motif common to many venom peptides. These are the first structures for any peptide or protein from spiders of the Scytodidae family. Many venom peptides target neuronal ion channels or receptors. However, we have not been able to determine the target of these Scytodes peptides so we can only state with certainty the channels and receptors that they do not target.

Characterization of Three Venom Peptides from the Spitting Spider Scytodes thoracica.,Ariki NK, Munoz LE, Armitage EL, Goodstein FR, George KG, Smith VL, Vetter I, Herzig V, King GF, Loening NM PLoS One. 2016 May 26;11(5):e0156291. doi: 10.1371/journal.pone.0156291., eCollection 2016. PMID:27227898^[2]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

↑ Ariki NK, Munoz LE, Armitage EL, Goodstein FR, George KG, Smith VL, Vetter I, Herzig V, King GF, Loening NM. Characterization of Three Venom Peptides from the Spitting Spider Scytodes thoracica. PLoS One. 2016 May 26;11(5):e0156291. doi: 10.1371/journal.pone.0156291., eCollection 2016. PMID:27227898 doi:http://dx.doi.org/10.1371/journal.pone.0156291
↑ Ariki NK, Munoz LE, Armitage EL, Goodstein FR, George KG, Smith VL, Vetter I, Herzig V, King GF, Loening NM. Characterization of Three Venom Peptides from the Spitting Spider Scytodes thoracica. PLoS One. 2016 May 26;11(5):e0156291. doi: 10.1371/journal.pone.0156291., eCollection 2016. PMID:27227898 doi:http://dx.doi.org/10.1371/journal.pone.0156291

1 Structural highlights
2 Function
3 Publication Abstract from PubMed
4 References

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5fzv"

Categories: Large Structures | Scytodes thoracica | Loening NM

@@ Line 1: / Line 1: @@
 ==High resolution solution NMR structure of the spider venom peptide U3- scytotoxin-Sth1a==
-<StructureSection load='5fzv' size='340' side='right'caption='[[5fzv]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+<StructureSection load='5fzv' size='340' side='right'caption='[[5fzv]]' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[5fzv]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FZV OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5FZV FirstGlance]. <br>
+<table><tr><td colspan='2'>[[5fzv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Scytodes_thoracica Scytodes thoracica]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FZV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5FZV FirstGlance]. <br>
-</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5fzw|5fzw]], [[5fzx|5fzx]]</td></tr>
+</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5fzv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5fzv OCA], [https://pdbe.org/5fzv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5fzv RCSB], [https://www.ebi.ac.uk/pdbsum/5fzv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5fzv ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5fzv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5fzv OCA], [http://pdbe.org/5fzv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5fzv RCSB], [http://www.ebi.ac.uk/pdbsum/5fzv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5fzv ProSAT]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/U31A_SCYTH U31A_SCYTH] Probable insect neurotoxin with ion channel impairing activity (Probable). Does not show activity on 45 human receptors from 9 families (5-hydroxytryptamine, adrenergic, dopamine, muscarinic, histamine, neurotransmitter, opioid, sigma, and gaba(A) receptors) (PubMed:27227898). In vivo, does not cause paralytic or lethal activity when injected into sheep blowflies (PubMed:27227898). When mixed with U3-SYTX-Sth1h does not cause paralytic or lethal activity when injected into crickets (PubMed:27227898). It is noteworthy that both sheep blowflies and crickets are evolutionarily distant from prey species (PubMed:27227898).<ref>PMID:27227898</ref>
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 21: / Line 22: @@
 </StructureSection>
 [[Category: Large Structures]]
-[[Category: Loening, N M]]
+[[Category: Scytodes thoracica]]
-[[Category: Ick]]
+[[Category: Loening NM]]
-[[Category: Spider venom peptide]]
-[[Category: Toxin]]

5fzv

From Proteopedia

Revision as of 10:09, 14 June 2023

High resolution solution NMR structure of the spider venom peptide U3- scytotoxin-Sth1a

Structural highlights

Function

Publication Abstract from PubMed

References

Contents

Proteopedia Page Contributors and Editors (what is this?)

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