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| | ==Solution structure of the cross-linked SAM domain dimer of murine SLy1== | | ==Solution structure of the cross-linked SAM domain dimer of murine SLy1== |
| - | <StructureSection load='6g8o' size='340' side='right'caption='[[6g8o]], [[NMR_Ensembles_of_Models | 15 NMR models]]' scene=''> | + | <StructureSection load='6g8o' size='340' side='right'caption='[[6g8o]]' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[6g8o]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6G8O OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6G8O FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6g8o]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6G8O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6G8O FirstGlance]. <br> |
| - | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[6fxf|6fxf]]</td></tr> | + | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6g8o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6g8o OCA], [https://pdbe.org/6g8o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6g8o RCSB], [https://www.ebi.ac.uk/pdbsum/6g8o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6g8o ProSAT]</span></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Sash3, Sly ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
| + | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6g8o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6g8o OCA], [http://pdbe.org/6g8o PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6g8o RCSB], [http://www.ebi.ac.uk/pdbsum/6g8o PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6g8o ProSAT]</span></td></tr> | + | |
| | </table> | | </table> |
| | == Function == | | == Function == |
| - | [[http://www.uniprot.org/uniprot/SASH3_MOUSE SASH3_MOUSE]] May function as a signaling adapter protein in lymphocytes.<ref>PMID:11470164</ref> | + | [https://www.uniprot.org/uniprot/SASH3_MOUSE SASH3_MOUSE] May function as a signaling adapter protein in lymphocytes.<ref>PMID:11470164</ref> |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| | == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| | </StructureSection> | | </StructureSection> |
| | [[Category: Large Structures]] | | [[Category: Large Structures]] |
| - | [[Category: Lk3 transgenic mice]] | + | [[Category: Mus musculus]] |
| - | [[Category: Dingley, A J]] | + | [[Category: Dingley AJ]] |
| - | [[Category: Koenig, B W]] | + | [[Category: Koenig BW]] |
| - | [[Category: Kukuk, L K]] | + | [[Category: Kukuk LK]] |
| - | [[Category: Adapter protein]]
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| - | [[Category: Sam]]
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| - | [[Category: Scaffold protein]]
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| - | [[Category: Signaling protein]]
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| - | [[Category: Sly1]]
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| Structural highlights
Function
SASH3_MOUSE May function as a signaling adapter protein in lymphocytes.[1]
Publication Abstract from PubMed
Sterile alpha motif (SAM) domains are protein interaction modules that are involved in a diverse range of biological functions such as transcriptional and translational regulation, cellular signalling, and regulation of developmental processes. SH3 domain-containing protein expressed in lymphocytes 1 (SLy1) is involved in immune regulation and contains a SAM domain of unknown function. In this report, the structure of the SLy1 SAM domain was solved and revealed that this SAM domain forms a symmetric homodimer through a novel interface. The interface consists primarily of the two long C-terminal helices, alpha5 and alpha5', of the domains packing against each other. The dimerization is characterized by a dissociation constant in the lower micromolar range. A SLy1 SAM domain construct with an extended N-terminus containing five additional amino acids of the SLy1 sequence further increases the stability of the homodimer, making the SLy1 SAM dimer two orders of magnitude more stable than previously studied SAM homodimers, suggesting that the SLy1 SAM dimerization is of functional significance. The SLy1 SAM homodimer contains an exposed mid-loop surface on each monomer, which may provide a scaffold for mediating interactions with other SAM domain-containing proteins via a typical mid-loop-end-helix interface.
Structure of the SLy1 SAM homodimer reveals a new interface for SAM domain self-association.,Kukuk L, Dingley AJ, Granzin J, Nagel-Steger L, Thiagarajan-Rosenkranz P, Ciupka D, Hanel K, Batra-Safferling R, Pacheco V, Stoldt M, Pfeffer K, Beer-Hammer S, Willbold D, Koenig BW Sci Rep. 2019 Jan 10;9(1):54. doi: 10.1038/s41598-018-37185-3. PMID:30631134[2]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Beer S, Simins AB, Schuster A, Holzmann B. Molecular cloning and characterization of a novel SH3 protein (SLY) preferentially expressed in lymphoid cells. Biochim Biophys Acta. 2001 Jul 30;1520(1):89-93. PMID:11470164
- ↑ Kukuk L, Dingley AJ, Granzin J, Nagel-Steger L, Thiagarajan-Rosenkranz P, Ciupka D, Hanel K, Batra-Safferling R, Pacheco V, Stoldt M, Pfeffer K, Beer-Hammer S, Willbold D, Koenig BW. Structure of the SLy1 SAM homodimer reveals a new interface for SAM domain self-association. Sci Rep. 2019 Jan 10;9(1):54. doi: 10.1038/s41598-018-37185-3. PMID:30631134 doi:http://dx.doi.org/10.1038/s41598-018-37185-3
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