7kn0
From Proteopedia
(Difference between revisions)
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- | ==== | + | ==Structure of the integrin aIIb(W968V)b3 transmembrane complex== |
<StructureSection load='7kn0' size='340' side='right'caption='[[7kn0]]' scene=''> | <StructureSection load='7kn0' size='340' side='right'caption='[[7kn0]]' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full | + | <table><tr><td colspan='2'>[[7kn0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7KN0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7KN0 FirstGlance]. <br> |
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7kn0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7kn0 OCA], [https://pdbe.org/7kn0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7kn0 RCSB], [https://www.ebi.ac.uk/pdbsum/7kn0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7kn0 ProSAT]</span></td></tr> | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7kn0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7kn0 OCA], [https://pdbe.org/7kn0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7kn0 RCSB], [https://www.ebi.ac.uk/pdbsum/7kn0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7kn0 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | == Disease == | ||
+ | [https://www.uniprot.org/uniprot/ITA2B_HUMAN ITA2B_HUMAN] Defects in ITGA2B are a cause of Glanzmann thrombasthenia (GT) [MIM:[https://omim.org/entry/273800 273800]; also known as thrombasthenia of Glanzmann and Naegeli. GT is the most common inherited disease of platelets. It is an autosomal recessive disorder characterized by mucocutaneous bleeding of mild-to-moderate severity and the inability of this integrin to recognize macromolecular or synthetic peptide ligands. GT has been classified clinically into types I and II. In type I, platelets show absence of the glycoprotein IIb/beta-3 complexes at their surface and lack fibrinogen and clot retraction capability. In type II, the platelets express the glycoprotein IIb/beta-3 complex at reduced levels (5-20% controls), have detectable amounts of fibrinogen, and have low or moderate clot retraction capability. The platelets of GT 'variants' have normal or near normal (60-100%) expression of dysfunctional receptors.<ref>PMID:8282784</ref> <ref>PMID:7508443</ref> <ref>PMID:7706461</ref> <ref>PMID:8704171</ref> <ref>PMID:9215749</ref> <ref>PMID:9473221</ref> <ref>PMID:9763559</ref> <ref>PMID:9722314</ref> <ref>PMID:9734640</ref> <ref>PMID:9920835</ref> <ref>PMID:10607701</ref> <ref>PMID:11798398</ref> <ref>PMID:12181054</ref> <ref>PMID:12083483</ref> <ref>PMID:12424194</ref> <ref>PMID:12506038</ref> <ref>PMID:15099289</ref> <ref>PMID:15219201</ref> <ref>PMID:17018384</ref> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/ITA2B_HUMAN ITA2B_HUMAN] Integrin alpha-IIb/beta-3 is a receptor for fibronectin, fibrinogen, plasminogen, prothrombin, thrombospondin and vitronectin. It recognizes the sequence R-G-D in a wide array of ligands. It recognizes the sequence H-H-L-G-G-G-A-K-Q-A-G-D-V in fibrinogen gamma chain. Following activation integrin alpha-IIb/beta-3 brings about platelet/platelet interaction through binding of soluble fibrinogen. This step leads to rapid platelet aggregation which physically plugs ruptured endothelial cell surface. | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | The inhibition of physiological activation pathways of the platelet adhesion receptor integrin alphaIIbbeta3 may fail to prevent fatal thrombosis, suggesting that the receptor is at risk of activation by yet an unidentified pathway. Here, we report the discovery and characterization of a structural motif that safeguards the receptor by selectively destabilizing its inactive state. At the extracellular membrane border, an overpacked alphaIIb(W968)-beta3(I693) contact prevents alphaIIb(Gly972) from optimally assembling the alphaIIbbeta3 transmembrane complex, which maintains the inactive state. This destabilization of approximately 1.0 kcal/mol could be mitigated by hydrodynamic forces but not physiological agonists, thereby identifying hydrodynamic forces as pathological activation stimulus. As reproductive life spans are not generally limited by cardiovascular disease, it appears that the evolution of the safeguard was driven by fatal, hydrodynamic force-mediated integrin alphaIIbbeta3 activation in the healthy cardiovascular system. The triggering of the safeguard solely by pathological stimuli achieves an effective increase of the free energy barrier between inactive and active receptor states without incurring an increased risk of bleeding. Thus, integrin alphaIIbbeta3 has evolved an effective way to protect receptor functional states that indicates the availability of a mechanical activation pathway when hydrodynamic forces exceed physiological margins. | ||
+ | |||
+ | Insight Into Pathological Integrin alphaIIbbeta3 Activation From Safeguarding The Inactive State.,Situ AJ, Kim J, An W, Kim C, Ulmer TS J Mol Biol. 2021 Apr 2;433(7):166832. doi: 10.1016/j.jmb.2021.166832. Epub 2021 , Feb 2. PMID:33539882<ref>PMID:33539882</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 7kn0" style="background-color:#fffaf0;"></div> | ||
+ | |||
+ | ==See Also== | ||
+ | *[[Integrin 3D structures|Integrin 3D structures]] | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
+ | [[Category: Homo sapiens]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: | + | [[Category: An W]] |
+ | [[Category: Kim C]] | ||
+ | [[Category: Kim J]] | ||
+ | [[Category: Situ AJ]] | ||
+ | [[Category: Ulmer TS]] |
Revision as of 11:13, 14 June 2023
Structure of the integrin aIIb(W968V)b3 transmembrane complex
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Categories: Homo sapiens | Large Structures | An W | Kim C | Kim J | Situ AJ | Ulmer TS