This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5df7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 3: Line 3:
<StructureSection load='5df7' size='340' side='right'caption='[[5df7]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='5df7' size='340' side='right'caption='[[5df7]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5df7]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_aeruginosus"_(schroeter_1872)_trevisan_1885 "bacillus aeruginosus" (schroeter 1872) trevisan 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DF7 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5DF7 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5df7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DF7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5DF7 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=59H:(2R,4S)-5,5-DIMETHYL-2-[(1R)-2-OXO-1-{[(2R)-2-{[(2-OXOIMIDAZOLIDIN-1-YL)CARBONYL]AMINO}-2-PHENYLACETYL]AMINO}ETHYL]-1,3-THIAZOLIDINE-4-CARBOXYLIC+ACID'>59H</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=59H:(2R,4S)-5,5-DIMETHYL-2-[(1R)-2-OXO-1-{[(2R)-2-{[(2-OXOIMIDAZOLIDIN-1-YL)CARBONYL]AMINO}-2-PHENYLACETYL]AMINO}ETHYL]-1,3-THIAZOLIDINE-4-CARBOXYLIC+ACID'>59H</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4kqo|4kqo]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5df7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5df7 OCA], [https://pdbe.org/5df7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5df7 RCSB], [https://www.ebi.ac.uk/pdbsum/5df7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5df7 ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pbpB, ftsI_2, ERS445055_04698, PAE221_03076, YQ19_27590 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 "Bacillus aeruginosus" (Schroeter 1872) Trevisan 1885])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptidoglycan_glycosyltransferase Peptidoglycan glycosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.129 2.4.1.129] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5df7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5df7 OCA], [http://pdbe.org/5df7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5df7 RCSB], [http://www.ebi.ac.uk/pdbsum/5df7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5df7 ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q51504_PSEAI Q51504_PSEAI]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 24: Line 23:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Peptidoglycan glycosyltransferase]]
+
[[Category: Pseudomonas aeruginosa]]
-
[[Category: Males, A]]
+
[[Category: Males A]]
-
[[Category: Nettleship, J E]]
+
[[Category: Nettleship JE]]
-
[[Category: Owens, R J]]
+
[[Category: Owens RJ]]
-
[[Category: Ren, J]]
+
[[Category: Ren J]]
-
[[Category: Stuart, D I]]
+
[[Category: Stuart DI]]
-
[[Category: Acyl-enzyme complex]]
+
-
[[Category: Azlocillin]]
+
-
[[Category: Beta-lactam antibiotic]]
+
-
[[Category: De-acylation]]
+
-
[[Category: Transferase]]
+

Revision as of 10:32, 21 June 2023

CRYSTAL STRUCTURE OF PENICILLIN-BINDING PROTEIN 3 FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH AZLOCILLIN

PDB ID 5df7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools