This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
5dfs
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
<StructureSection load='5dfs' size='340' side='right'caption='[[5dfs]], [[Resolution|resolution]] 1.15Å' scene=''> | <StructureSection load='5dfs' size='340' side='right'caption='[[5dfs]], [[Resolution|resolution]] 1.15Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5dfs]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[5dfs]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ateles_sp. Ateles sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DFS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5DFS FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene></td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CYCS, CYC ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9511 ATESP])</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5dfs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dfs OCA], [https://pdbe.org/5dfs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5dfs RCSB], [https://www.ebi.ac.uk/pdbsum/5dfs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5dfs ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5dfs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dfs OCA], [https://pdbe.org/5dfs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5dfs RCSB], [https://www.ebi.ac.uk/pdbsum/5dfs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5dfs ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
| - | + | [https://www.uniprot.org/uniprot/CYC_ATESP CYC_ATESP] Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. Plays a role in apoptosis. Suppression of the anti-apoptotic members or activation of the pro-apoptotic members of the Bcl-2 family leads to altered mitochondrial membrane permeability resulting in release of cytochrome c into the cytosol. Binding of cytochrome c to Apaf-1 triggers the activation of caspase-9, which then accelerates apoptosis by activating other caspases (By similarity). | |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 26: | Line 25: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Ateles sp]] |
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: BOWLER | + | [[Category: BOWLER BE]] |
| - | [[Category: Goldes | + | [[Category: Goldes ME]] |
| - | [[Category: Jeakins-Cooley | + | [[Category: Jeakins-Cooley ME]] |
| - | [[Category: MOU | + | [[Category: MOU TC]] |
| - | [[Category: McClelland | + | [[Category: McClelland LJ]] |
| - | [[Category: SPRANG | + | [[Category: SPRANG SR]] |
| - | + | ||
| - | + | ||
Revision as of 10:33, 21 June 2023
Crystal structure of Spider Monkey Cytochrome C at 1.15 Angstrom
| |||||||||||
