User:Marcos Vinícius Caetano/Sandbox 1
From Proteopedia
(Difference between revisions)
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'''Location''': This insert is between the converter and the IQ motif | '''Location''': This insert is between the converter and the IQ motif | ||
- | '''Function''': Redirectionare the lever arm and | + | '''Function''': Redirectionare the lever arm and contains a new CaM-binding motif. |
'''Mechanism''': The proximal part of insert 2 (<scene name='97/973101/774_812_distal_and_proximal/3'>Pro774-Trp787</scene> - shown in red) wraps around the converter, while the distal part (<scene name='97/973101/774_812_distal_and_proximal/3'>Trp787-Tyr812</scene> - shown in green) forms a CaM-binding motif. The insert 2 and its associated CaM molecule (with 4Ca2+), make specific interactions with the converter, many involving a variable loop (<scene name='97/973101/774-812_orange_magenta/1'>Lys719-Pro731</scene>). THe result of interactions is that IQ helix emerges ~120° from the position that it emerges in all other myosins, redirecting the IQ helix and the CaM towards the minus end of the actin filament. | '''Mechanism''': The proximal part of insert 2 (<scene name='97/973101/774_812_distal_and_proximal/3'>Pro774-Trp787</scene> - shown in red) wraps around the converter, while the distal part (<scene name='97/973101/774_812_distal_and_proximal/3'>Trp787-Tyr812</scene> - shown in green) forms a CaM-binding motif. The insert 2 and its associated CaM molecule (with 4Ca2+), make specific interactions with the converter, many involving a variable loop (<scene name='97/973101/774-812_orange_magenta/1'>Lys719-Pro731</scene>). THe result of interactions is that IQ helix emerges ~120° from the position that it emerges in all other myosins, redirecting the IQ helix and the CaM towards the minus end of the actin filament. |
Revision as of 12:05, 25 June 2023
Myosin VI nucleotide-free (MDinsert2-IQ) crystal structure
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References
- ↑ Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
- ↑ Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644