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5dhr

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Current revision (21:42, 28 June 2023) (edit) (undo)
 
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<StructureSection load='5dhr' size='340' side='right'caption='[[5dhr]], [[Resolution|resolution]] 2.31&Aring;' scene=''>
<StructureSection load='5dhr' size='340' side='right'caption='[[5dhr]], [[Resolution|resolution]] 2.31&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5dhr]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DHR OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5DHR FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5dhr]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Listeria_monocytogenes_EGD-e Listeria monocytogenes EGD-e]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DHR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5DHR FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5AJ:5-AZIDO-8-[(2-{[2-(1H-BENZIMIDAZOL-2-YL)ETHYL]AMINO}-2-OXOETHYL)SULFANYL]-5-DEOXYADENOSINE'>5AJ</scene>, <scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.31&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5dhu|5dhu]], [[5dht|5dht]], [[5dhs|5dhs]], [[5dhq|5dhq]], [[5dhp|5dhp]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5AJ:5-AZIDO-8-[(2-{[2-(1H-BENZIMIDAZOL-2-YL)ETHYL]AMINO}-2-OXOETHYL)SULFANYL]-5-DEOXYADENOSINE'>5AJ</scene>, <scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/NAD(+)_kinase NAD(+) kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.23 2.7.1.23] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5dhr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dhr OCA], [https://pdbe.org/5dhr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5dhr RCSB], [https://www.ebi.ac.uk/pdbsum/5dhr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5dhr ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5dhr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dhr OCA], [http://pdbe.org/5dhr PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5dhr RCSB], [http://www.ebi.ac.uk/pdbsum/5dhr PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5dhr ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/NADK1_LISMO NADK1_LISMO]] Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.[HAMAP-Rule:MF_00361]<ref>PMID:17686780</ref> <ref>PMID:22608967</ref>
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[https://www.uniprot.org/uniprot/NADK1_LISMO NADK1_LISMO] Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.[HAMAP-Rule:MF_00361]<ref>PMID:17686780</ref> <ref>PMID:22608967</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Assairi, L]]
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[[Category: Listeria monocytogenes EGD-e]]
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[[Category: Gelin, M]]
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[[Category: Assairi L]]
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[[Category: Huteau, V]]
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[[Category: Gelin M]]
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[[Category: Labesse, G]]
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[[Category: Huteau V]]
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[[Category: Paoletti, J]]
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[[Category: Labesse G]]
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[[Category: Pochet, S]]
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[[Category: Paoletti J]]
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[[Category: Tetrameric nad kinase]]
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[[Category: Pochet S]]
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[[Category: Transferase]]
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Current revision

Crystal structure of NAD kinase 1 from Listeria monocytogenes in complex with a novel inhibitor

PDB ID 5dhr

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