5dul

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (22:00, 28 June 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5dul' size='340' side='right'caption='[[5dul]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
<StructureSection load='5dul' size='340' side='right'caption='[[5dul]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5dul]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_pestis"_(lehmann_and_neumann_1896)_migula_1900 "bacillus pestis" (lehmann and neumann 1896) migula 1900]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DUL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5DUL FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5dul]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pestis Yersinia pestis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DUL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5DUL FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3iie|3iie]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dxr, YPO1048, y3131, YP_2802 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=632 "Bacillus pestis" (Lehmann and Neumann 1896) Migula 1900])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5dul FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dul OCA], [https://pdbe.org/5dul PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5dul RCSB], [https://www.ebi.ac.uk/pdbsum/5dul PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5dul ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/1-deoxy-D-xylulose-5-phosphate_reductoisomerase 1-deoxy-D-xylulose-5-phosphate reductoisomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.267 1.1.1.267] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5dul FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dul OCA], [http://pdbe.org/5dul PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5dul RCSB], [http://www.ebi.ac.uk/pdbsum/5dul PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5dul ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/DXR_YERPE DXR_YERPE]] Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).[HAMAP-Rule:MF_00183]
+
[https://www.uniprot.org/uniprot/DXR_YERPE DXR_YERPE] Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).[HAMAP-Rule:MF_00183]
==See Also==
==See Also==
-
*[[DXP reductoisomerase|DXP reductoisomerase]]
+
*[[DXP reductoisomerase 3D Structures|DXP reductoisomerase 3D Structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: 1-deoxy-D-xylulose-5-phosphate reductoisomerase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Anderson, W F]]
+
[[Category: Yersinia pestis]]
-
[[Category: Structural genomic]]
+
[[Category: Anderson WF]]
-
[[Category: Joachimiak, A]]
+
[[Category: Joachimiak A]]
-
[[Category: Mulligan, R]]
+
[[Category: Mulligan R]]
-
[[Category: Osipiuk, J]]
+
[[Category: Osipiuk J]]
-
[[Category: Stam, J]]
+
[[Category: Stam J]]
-
[[Category: Csgid]]
+
-
[[Category: Idp00499]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Reductoisomerase]]
+
-
[[Category: Xylulose]]
+

Current revision

1-deoxy-D-xylulose 5-phosphate reductoisomerase from Yersinia pestis in complex with NADPH

PDB ID 5dul

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools