This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5e62

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:14, 5 July 2023) (edit) (undo)
 
Line 1: Line 1:
==HEF-mut with Tr323 complex==
==HEF-mut with Tr323 complex==
-
<StructureSection load='5e62' size='340' side='right' caption='[[5e62]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
+
<StructureSection load='5e62' size='340' side='right'caption='[[5e62]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5e62]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Influenza_c_virus_(c/swine/oklahoma/1334/2011) Influenza c virus (c/swine/oklahoma/1334/2011)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5E62 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5E62 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5e62]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Influenza_D_virus_(D/swine/Oklahoma/1334/2011) Influenza D virus (D/swine/Oklahoma/1334/2011)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5E62 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5E62 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=5N6:(2~{R},4~{S},5~{R},6~{R})-5-ACETAMIDO-6-[(1~{R},2~{R})-3-ACETYLOXY-1,2-BIS(OXIDANYL)PROPYL]-2,4-BIS(OXIDANYL)OXANE-2-CARBOXYLIC+ACID'>5N6</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=Z3Q:2-AZIDOETHYL+2-(ACETYLAMINO)-2-DEOXY-BETA-D-GLUCOPYRANOSIDE'>Z3Q</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.203&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5e66|5e66]], [[5e5w|5e5w]], [[5e64|5e64]], [[5e65|5e65]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5N6:(2~{R},4~{S},5~{R},6~{R})-5-ACETAMIDO-6-[(1~{R},2~{R})-3-ACETYLOXY-1,2-BIS(OXIDANYL)PROPYL]-2,4-BIS(OXIDANYL)OXANE-2-CARBOXYLIC+ACID'>5N6</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=Z3Q:2-AZIDOETHYL+2-(ACETYLAMINO)-2-DEOXY-BETA-D-GLUCOPYRANOSIDE'>Z3Q</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">HEF ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1173138 Influenza C virus (C/swine/Oklahoma/1334/2011)])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5e62 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5e62 OCA], [https://pdbe.org/5e62 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5e62 RCSB], [https://www.ebi.ac.uk/pdbsum/5e62 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5e62 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5e62 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5e62 OCA], [http://pdbe.org/5e62 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5e62 RCSB], [http://www.ebi.ac.uk/pdbsum/5e62 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5e62 ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/K9LG83_9ORTO K9LG83_9ORTO]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 20: Line 21:
==See Also==
==See Also==
-
*[[Hemagglutinin-esterase|Hemagglutinin-esterase]]
+
*[[Hemagglutinin-esterase 3D structures|Hemagglutinin-esterase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Gao, G F]]
+
[[Category: Large Structures]]
-
[[Category: Qi, J]]
+
[[Category: Gao GF]]
-
[[Category: Shi, Y]]
+
[[Category: Qi J]]
-
[[Category: Song, H]]
+
[[Category: Shi Y]]
-
[[Category: Complex]]
+
[[Category: Song H]]
-
[[Category: Hef]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Influenza]]
+

Current revision

HEF-mut with Tr323 complex

PDB ID 5e62

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5e62"
Personal tools