5e9s

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:18, 5 July 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5e9s' size='340' side='right'caption='[[5e9s]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
<StructureSection load='5e9s' size='340' side='right'caption='[[5e9s]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5e9s]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/"thermococcus_kodakaraensis"_atomi_et_al._2004 "thermococcus kodakaraensis" atomi et al. 2004]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5E9S OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5E9S FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5e9s]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermococcus_kodakarensis Thermococcus kodakarensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5E9S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5E9S FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1PE:PENTAETHYLENE+GLYCOL'>1PE</scene>, <scene name='pdbligand=ASP:ASPARTIC+ACID'>ASP</scene>, <scene name='pdbligand=DMU:DECYL-BETA-D-MALTOPYRANOSIDE'>DMU</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=P6G:HEXAETHYLENE+GLYCOL'>P6G</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5dwy|5dwy]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1PE:PENTAETHYLENE+GLYCOL'>1PE</scene>, <scene name='pdbligand=ASP:ASPARTIC+ACID'>ASP</scene>, <scene name='pdbligand=DMU:DECYL-BETA-D-MALTOPYRANOSIDE'>DMU</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=P6G:HEXAETHYLENE+GLYCOL'>P6G</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TK0986 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=311400 "Thermococcus kodakaraensis" Atomi et al. 2004])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5e9s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5e9s OCA], [https://pdbe.org/5e9s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5e9s RCSB], [https://www.ebi.ac.uk/pdbsum/5e9s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5e9s ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5e9s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5e9s OCA], [http://pdbe.org/5e9s PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5e9s RCSB], [http://www.ebi.ac.uk/pdbsum/5e9s PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5e9s ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q5JID0_THEKO Q5JID0_THEKO]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 25: Line 26:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Thermococcus kodakaraensis atomi et al. 2004]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Guskov, A]]
+
[[Category: Thermococcus kodakarensis]]
-
[[Category: Slotboom, D J]]
+
[[Category: Guskov A]]
-
[[Category: Amino acid transporter]]
+
[[Category: Slotboom DJ]]
-
[[Category: Aspartate transport]]
+
-
[[Category: Glutamate transport homologue]]
+
-
[[Category: Membrane protein]]
+
-
[[Category: Transport protein]]
+

Current revision

Crystal structure of substrate-bound glutamate transporter homologue GltTk

PDB ID 5e9s

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools