This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5eff

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:24, 5 July 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5eff' size='340' side='right'caption='[[5eff]], [[Resolution|resolution]] 2.23&Aring;' scene=''>
<StructureSection load='5eff' size='340' side='right'caption='[[5eff]], [[Resolution|resolution]] 2.23&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5eff]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_sp._ng-27 Bacillus sp. ng-27]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5EFF OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5EFF FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5eff]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_sp._NG-27 Bacillus sp. NG-27]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5EFF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5EFF FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.23&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5eb8|5eb8]], [[5eba|5eba]], [[5efd|5efd]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Endo-1,4-beta-xylanase Endo-1,4-beta-xylanase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.8 3.2.1.8] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5eff FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5eff OCA], [https://pdbe.org/5eff PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5eff RCSB], [https://www.ebi.ac.uk/pdbsum/5eff PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5eff ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5eff FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5eff OCA], [http://pdbe.org/5eff PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5eff RCSB], [http://www.ebi.ac.uk/pdbsum/5eff PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5eff ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/O30700_9BACI O30700_9BACI]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacillus sp. ng-27]]
+
[[Category: Bacillus sp. NG-27]]
-
[[Category: Endo-1,4-beta-xylanase]]
+
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Bhardwaj, A]]
+
[[Category: Bhardwaj A]]
-
[[Category: Mahanta, P]]
+
[[Category: Mahanta P]]
-
[[Category: Ramakumar, S]]
+
[[Category: Ramakumar S]]
-
[[Category: Reddy, V S]]
+
[[Category: Reddy VS]]
-
[[Category: Hydrolase]]
+
-
[[Category: Mutant]]
+
-
[[Category: Xylanase]]
+

Current revision

Crystal structure of an aromatic mutant (F4A) of an alkali thermostable GH10 xylanase from Bacillus sp. NG-27

PDB ID 5eff

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools