This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5el2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:32, 5 July 2023) (edit) (undo)
 
Line 1: Line 1:
==Crystal structure of Odorant Binding Protein 1 from Anopheles gambiae (AgamOBP1) with Icaridin (butan-2-yl 2-(2-hydroxyethyl)piperidine-1-carboxylate)==
==Crystal structure of Odorant Binding Protein 1 from Anopheles gambiae (AgamOBP1) with Icaridin (butan-2-yl 2-(2-hydroxyethyl)piperidine-1-carboxylate)==
-
<StructureSection load='5el2' size='340' side='right' caption='[[5el2]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
+
<StructureSection load='5el2' size='340' side='right'caption='[[5el2]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5el2]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Anoga Anoga]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5EL2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5EL2 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5el2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Anopheles_gambiae Anopheles gambiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5EL2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5EL2 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=KBR:ICARIDIN'>KBR</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AgamOBP1, OBP17, AgaP_AGAP003309, agCG48275 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7165 ANOGA])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=KBR:ICARIDIN'>KBR</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5el2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5el2 OCA], [http://pdbe.org/5el2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5el2 RCSB], [http://www.ebi.ac.uk/pdbsum/5el2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5el2 ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5el2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5el2 OCA], [https://pdbe.org/5el2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5el2 RCSB], [https://www.ebi.ac.uk/pdbsum/5el2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5el2 ProSAT]</span></td></tr>
</table>
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 17: Line 17:
</div>
</div>
<div class="pdbe-citations 5el2" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5el2" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Odorant binding protein 3D structures|Odorant binding protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Anoga]]
+
[[Category: Anopheles gambiae]]
-
[[Category: Drakou, C E]]
+
[[Category: Large Structures]]
-
[[Category: Tsitsanou, K E]]
+
[[Category: Drakou CE]]
-
[[Category: Zographos, S E]]
+
[[Category: Tsitsanou KE]]
-
[[Category: Agamobp1]]
+
[[Category: Zographos SE]]
-
[[Category: Icaridin]]
+
-
[[Category: Insect odorant-binding protein]]
+
-
[[Category: Obp1]]
+
-
[[Category: Olfaction]]
+
-
[[Category: Transport protein]]
+

Current revision

Crystal structure of Odorant Binding Protein 1 from Anopheles gambiae (AgamOBP1) with Icaridin (butan-2-yl 2-(2-hydroxyethyl)piperidine-1-carboxylate)

PDB ID 5el2

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools