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5elb

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Current revision (06:32, 5 July 2023) (edit) (undo)
 
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<StructureSection load='5elb' size='340' side='right'caption='[[5elb]], [[Resolution|resolution]] 1.08&Aring;' scene=''>
<StructureSection load='5elb' size='340' side='right'caption='[[5elb]], [[Resolution|resolution]] 1.08&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5elb]] is a 10 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae_01 Vibrio cholerae 01]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ELB OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5ELB FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5elb]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_O1 Vibrio cholerae O1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ELB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5ELB FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BCN:BICINE'>BCN</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=GLA:ALPHA+D-GALACTOSE'>GLA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.08&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ctxB, EN12_07055, ERS013160_03498, ERS013165_03981, ERS013197_06217, ERS013202_03762, ERS013206_03003, ERS013207_03244, ERS013212_03447 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=127906 Vibrio cholerae 01])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BCN:BICINE'>BCN</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=GLA:ALPHA+D-GALACTOSE'>GLA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PRD_900124:Lewis+Y+antigen,+alpha+anomer'>PRD_900124</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5elb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5elb OCA], [http://pdbe.org/5elb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5elb RCSB], [http://www.ebi.ac.uk/pdbsum/5elb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5elb ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5elb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5elb OCA], [https://pdbe.org/5elb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5elb RCSB], [https://www.ebi.ac.uk/pdbsum/5elb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5elb ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q57193_VIBCL Q57193_VIBCL]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Vibrio cholerae 01]]
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[[Category: Vibrio cholerae O1]]
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[[Category: Burschowsky, D]]
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[[Category: Burschowsky D]]
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[[Category: Heggelund, J E]]
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[[Category: Heggelund JE]]
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[[Category: Krengel, U]]
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[[Category: Krengel U]]
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[[Category: Blood group oligosaccharide/antigen]]
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[[Category: Cholera toxin b-pentamer]]
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[[Category: Complex]]
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[[Category: Lewis-y]]
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[[Category: Toxin]]
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Current revision

Cholera toxin classical B-pentamer in complex with Lewis-y

PDB ID 5elb

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OCA

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