This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5eqx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:17, 12 July 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5eqx' size='340' side='right'caption='[[5eqx]], [[Resolution|resolution]] 3.05&Aring;' scene=''>
<StructureSection load='5eqx' size='340' side='right'caption='[[5eqx]], [[Resolution|resolution]] 3.05&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5eqx]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5EQX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5EQX FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5eqx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5EQX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5EQX FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.05&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5erd|5erd]], [[5erp|5erp]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DSG3, CDHF6 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5eqx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5eqx OCA], [https://pdbe.org/5eqx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5eqx RCSB], [https://www.ebi.ac.uk/pdbsum/5eqx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5eqx ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5eqx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5eqx OCA], [http://pdbe.org/5eqx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5eqx RCSB], [http://www.ebi.ac.uk/pdbsum/5eqx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5eqx ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/DSG3_HUMAN DSG3_HUMAN]] Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
+
[https://www.uniprot.org/uniprot/DSG3_HUMAN DSG3_HUMAN] Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 27: Line 26:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Human]]
+
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Brasch, J]]
+
[[Category: Brasch J]]
-
[[Category: Harrison, O J]]
+
[[Category: Harrison OJ]]
-
[[Category: Shapiro, L]]
+
[[Category: Shapiro L]]
-
[[Category: Cell adhesion]]
+
-
[[Category: Cell surface]]
+
-
[[Category: Desmosome]]
+
-
[[Category: Extracellular cadherin domain]]
+

Current revision

Crystal structure of human Desmoglein-3 ectodomain

PDB ID 5eqx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools