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| <StructureSection load='5ez2' size='340' side='right'caption='[[5ez2]], [[Resolution|resolution]] 1.85Å' scene=''> | | <StructureSection load='5ez2' size='340' side='right'caption='[[5ez2]], [[Resolution|resolution]] 1.85Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[5ez2]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Perca_vitrea Perca vitrea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5EZ2 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5EZ2 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5ez2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Sander_vitreus Sander vitreus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5EZ2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5EZ2 FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.849Å</td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5f1e|5f1e]]</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BLA:BILIVERDINE+IX+ALPHA'>BLA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5ez2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ez2 OCA], [http://pdbe.org/5ez2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ez2 RCSB], [http://www.ebi.ac.uk/pdbsum/5ez2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ez2 ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ez2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ez2 OCA], [https://pdbe.org/5ez2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ez2 RCSB], [https://www.ebi.ac.uk/pdbsum/5ez2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ez2 ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/A0A1D5B367_SANVI A0A1D5B367_SANVI] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| </StructureSection> | | </StructureSection> |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Perca vitrea]] | + | [[Category: Sander vitreus]] |
- | [[Category: Ghosh, S]] | + | [[Category: Ghosh S]] |
- | [[Category: Ramaswamy, S]] | + | [[Category: Ramaswamy S]] |
- | [[Category: Biliverdin]]
| + | |
- | [[Category: Fluorescent protein]]
| + | |
- | [[Category: Lipocalin]]
| + | |
- | [[Category: Photo-stability]]
| + | |
- | [[Category: Red-fluorescent protein]]
| + | |
- | [[Category: Sandercyanin]]
| + | |
| Structural highlights
Function
A0A1D5B367_SANVI
Publication Abstract from PubMed
The walleye (Sander vitreus) is a golden yellow fish that inhabits the Northern American lakes. The recent sightings of the blue walleye and the correlation of its sighting to possible increased UV radiation have been proposed earlier. The underlying molecular basis of its adaptation to increased UV radiation is the presence of a protein (Sandercyanin)-ligand complex in the mucus of walleyes. Degradation of heme by UV radiation results in the formation of Biliverdin IXalpha (BLA), the chromophore bound to Sandercyanin. We show that Sandercyanin is a monomeric protein that forms stable homotetramers on addition of BLA to the protein. A structure of the Sandercyanin-BLA complex, purified from the fish mucus, reveals a glycosylated protein with a lipocalin fold. This protein-ligand complex absorbs light in the UV region (lambdamax of 375 nm) and upon excitation at this wavelength emits in the red region (lambdamax of 675 nm). Unlike all other known biliverdin-bound fluorescent proteins, the chromophore is noncovalently bound to the protein. We provide here a molecular rationale for the observed spectral properties of Sandercyanin.
Blue protein with red fluorescence.,Ghosh S, Yu CL, Ferraro DJ, Sudha S, Pal SK, Schaefer WF, Gibson DT, Ramaswamy S Proc Natl Acad Sci U S A. 2016 Oct 11;113(41):11513-11518. Epub 2016 Sep 29. PMID:27688756[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Ghosh S, Yu CL, Ferraro DJ, Sudha S, Pal SK, Schaefer WF, Gibson DT, Ramaswamy S. Blue protein with red fluorescence. Proc Natl Acad Sci U S A. 2016 Oct 11;113(41):11513-11518. Epub 2016 Sep 29. PMID:27688756 doi:http://dx.doi.org/10.1073/pnas.1525622113
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