5ff4
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
<StructureSection load='5ff4' size='340' side='right'caption='[[5ff4]], [[Resolution|resolution]] 1.35Å' scene=''> | <StructureSection load='5ff4' size='340' side='right'caption='[[5ff4]], [[Resolution|resolution]] 1.35Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5ff4]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[5ff4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FF4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5FF4 FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5ZZ:(2~{R},4~{R})-2,5,5-TRIMETHYL-1,3-THIAZOLIDINE-2,4-DICARBOXYLIC+ACID'>5ZZ</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CPS:3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE'>CPS</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene>, <scene name='pdbligand=SE:SELENIUM+ATOM'>SE</scene>, <scene name='pdbligand=SFS:FE4-SE4+CLUSTER'>SFS</scene> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.35Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5ZZ:(2~{R},4~{R})-2,5,5-TRIMETHYL-1,3-THIAZOLIDINE-2,4-DICARBOXYLIC+ACID'>5ZZ</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CPS:3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE'>CPS</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene>, <scene name='pdbligand=SE:SELENIUM+ATOM'>SE</scene>, <scene name='pdbligand=SFS:FE4-SE4+CLUSTER'>SFS</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ff4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ff4 OCA], [https://pdbe.org/5ff4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ff4 RCSB], [https://www.ebi.ac.uk/pdbsum/5ff4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ff4 ProSAT]</span></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/HYDE_THEMA HYDE_THEMA] Required for the maturation of the [FeFe]-hydrogenase HydA (By similarity). Catalyzes the reductive cleavage of S-adenosyl-L-methionine (in vitro), suggesting it may contribute to the biosynthesis of an essential sulfur-containing ligand that binds to the hydrogenase active site [2Fe-2S] cluster (PubMed:16137685).[UniProtKB:Q97IK9]<ref>PMID:16137685</ref> |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 24: | Line 23: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Atcc 43589]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Amara | + | [[Category: Thermotoga maritima]] |
| - | [[Category: Benjdia | + | [[Category: Amara P]] |
| - | [[Category: Berteau | + | [[Category: Benjdia A]] |
| - | [[Category: Favier | + | [[Category: Berteau O]] |
| - | [[Category: Fontecilla-Camps | + | [[Category: Favier A]] |
| - | [[Category: Martin | + | [[Category: Fontecilla-Camps JC]] |
| - | [[Category: Mouesca | + | [[Category: Martin L]] |
| - | [[Category: Nicolet | + | [[Category: Mouesca JM]] |
| - | [[Category: Rohac | + | [[Category: Nicolet Y]] |
| - | [[Category: Ruffie | + | [[Category: Rohac R]] |
| - | + | [[Category: Ruffie P]] | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
HydE from T. maritima in complex with (2R,4R)-TMeTDA
| |||||||||||
Categories: Large Structures | Thermotoga maritima | Amara P | Benjdia A | Berteau O | Favier A | Fontecilla-Camps JC | Martin L | Mouesca JM | Nicolet Y | Rohac R | Ruffie P
