1lr5

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[[Image:1lr5.gif|left|200px]]
[[Image:1lr5.gif|left|200px]]
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{{Structure
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|PDB= 1lr5 |SIZE=350|CAPTION= <scene name='initialview01'>1lr5</scene>, resolution 1.9&Aring;
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|LIGAND= <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
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{{STRUCTURE_1lr5| PDB=1lr5 | SCENE= }}
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|RELATEDENTRY=[[1lrh|1LRH]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1lr5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lr5 OCA], [http://www.ebi.ac.uk/pdbsum/1lr5 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1lr5 RCSB]</span>
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'''Crystal structure of auxin binding protein'''
'''Crystal structure of auxin binding protein'''
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[[Category: Venis, M.]]
[[Category: Venis, M.]]
[[Category: Woo, E J.]]
[[Category: Woo, E J.]]
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[[Category: beta jellyroll]]
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[[Category: Beta jellyroll]]
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[[Category: double stranded beta helix]]
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[[Category: Double stranded beta helix]]
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[[Category: germin-like protein]]
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[[Category: Germin-like protein]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 22:06:18 2008''
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Revision as of 21:12, 2 May 2008

Template:STRUCTURE 1lr5

Crystal structure of auxin binding protein


Overview

The structure of auxin-binding protein 1 (ABP1) from maize has been determined at 1.9 A resolution, revealing its auxin-binding site. The structure confirms that ABP1 belongs to the ancient and functionally diverse germin/seed storage 7S protein superfamily. The binding pocket of ABP1 is predominantly hydrophobic with a metal ion deep inside the pocket coordinated by three histidines and a glutamate. Auxin binds within this pocket, with its carboxylate binding the zinc and its aromatic ring binding hydrophobic residues including Trp151. There is a single disulfide between Cys2 and Cys155. No conformational rearrangement of ABP1 was observed when auxin bound to the protein in the crystal, but examination of the structure reveals a possible mechanism of signal transduction.

About this Structure

1LR5 is a Single protein structure of sequence from Zea mays. Full crystallographic information is available from OCA.

Reference

Crystal structure of auxin-binding protein 1 in complex with auxin., Woo EJ, Marshall J, Bauly J, Chen JG, Venis M, Napier RM, Pickersgill RW, EMBO J. 2002 Jun 17;21(12):2877-85. PMID:12065401 Page seeded by OCA on Sat May 3 00:12:21 2008

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