4lmq
From Proteopedia
(Difference between revisions)
Line 3: | Line 3: | ||
<StructureSection load='4lmq' size='340' side='right'caption='[[4lmq]], [[Resolution|resolution]] 2.77Å' scene=''> | <StructureSection load='4lmq' size='340' side='right'caption='[[4lmq]], [[Resolution|resolution]] 2.77Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[4lmq]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[4lmq]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LMQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4LMQ FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.773Å</td></tr> |
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4lmq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lmq OCA], [https://pdbe.org/4lmq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4lmq RCSB], [https://www.ebi.ac.uk/pdbsum/4lmq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4lmq ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4lmq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lmq OCA], [https://pdbe.org/4lmq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4lmq RCSB], [https://www.ebi.ac.uk/pdbsum/4lmq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4lmq ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
- | + | [https://www.uniprot.org/uniprot/SDF1_HUMAN SDF1_HUMAN] Chemoattractant active on T-lymphocytes, monocytes, but not neutrophils. Activates the C-X-C chemokine receptor CXCR4 to induce a rapid and transient rise in the level of intracellular calcium ions and chemotaxis. Also binds to another C-X-C chemokine receptor CXCR7, which activates the beta-arrestin pathway and acts as a scavenger receptor for SDF-1. SDF-1-beta(3-72) and SDF-1-alpha(3-67) show a reduced chemotactic activity. Binding to cell surface proteoglycans seems to inhibit formation of SDF-1-alpha(3-67) and thus to preserve activity on local sites. Acts as a positive regulator of monocyte migration and a negative regulator of monocyte adhesion via the LYN kinase. Stimulates migration of monocytes and T-lymphocytes through its receptors, CXCR4 and CXCR7, and decreases monocyte adherence to surfaces coated with ICAM-1, a ligand for beta-2 integrins. SDF1A/CXCR4 signaling axis inhibits beta-2 integrin LFA-1 mediated adhesion of monocytes to ICAM-1 through LYN kinase. Inhibits CXCR4-mediated infection by T-cell line-adapted HIV-1. Plays a protective role after myocardial infarction. Induces down-regulation and internalization of CXCR7 expressed in various cells. Has several critical functions during embryonic development; required for B-cell lymphopoiesis, myelopoiesis in bone marrow and heart ventricular septum formation.<ref>PMID:8752281</ref> <ref>PMID:11069075</ref> <ref>PMID:11859124</ref> <ref>PMID:16107333</ref> <ref>PMID:18802065</ref> <ref>PMID:19255243</ref> | |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
Line 25: | Line 25: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Homo sapiens]] |
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Adams | + | [[Category: Adams C]] |
- | [[Category: Barck | + | [[Category: Barck K]] |
- | [[Category: Carano | + | [[Category: Carano RD]] |
- | [[Category: Chiang | + | [[Category: Chiang NY]] |
- | [[Category: Clark | + | [[Category: Clark R]] |
- | [[Category: Clark | + | [[Category: Clark S]] |
- | [[Category: Coons | + | [[Category: Coons M]] |
- | [[Category: Corpuz | + | [[Category: Corpuz R]] |
- | [[Category: Damico-Beyer | + | [[Category: Damico-Beyer LA]] |
- | [[Category: Ferrara | + | [[Category: Ferrara N]] |
- | [[Category: Gribling | + | [[Category: Gribling P]] |
- | [[Category: Kelley | + | [[Category: Kelley RF]] |
- | [[Category: Lee | + | [[Category: Lee WP]] |
- | [[Category: Li | + | [[Category: Li B]] |
- | [[Category: Quintana | + | [[Category: Quintana L]] |
- | [[Category: Suto | + | [[Category: Suto E]] |
- | [[Category: Takkar | + | [[Category: Takkar R]] |
- | [[Category: Ultsch | + | [[Category: Ultsch M]] |
- | [[Category: Wang | + | [[Category: Wang J]] |
- | [[Category: Wang | + | [[Category: Wang W]] |
- | [[Category: Wong | + | [[Category: Wong T]] |
- | [[Category: Xiang | + | [[Category: Xiang H]] |
- | [[Category: Yao | + | [[Category: Yao J]] |
- | [[Category: Zhong | + | [[Category: Zhong Z]] |
- | + | ||
- | + |
Current revision
Development and Preclinical Characterization of a Humanized Antibody Targeting CXCL12
|
Categories: Homo sapiens | Large Structures | Adams C | Barck K | Carano RD | Chiang NY | Clark R | Clark S | Coons M | Corpuz R | Damico-Beyer LA | Ferrara N | Gribling P | Kelley RF | Lee WP | Li B | Quintana L | Suto E | Takkar R | Ultsch M | Wang J | Wang W | Wong T | Xiang H | Yao J | Zhong Z